RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 E5RJQ4 531 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 STX16-NPEPL1H3BU86 382 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 M0R2N6 131 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 PDGFRAP16234 1089 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 EPHA3P29320 983 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 DSG3P32926 999 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 CCNG2Q16589 344 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 CLEC16AQ2KHT3 1053 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 SFT2D3Q587I9 215 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 MAP3K21Q5TCX8 1036 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 PDPK2PQ6A1A2 396 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 SLFN11Q7Z7L1 901 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 PPIL6Q8IXY8 311 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 TMEM130Q8N3G9 435 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 KLC2Q9H0B6 622 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 DMAP1Q9NPF5 467 aaPredicted RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 ARHGAP10A1A4S6 786 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 T-ENOLP0DO92 83 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 RPL10P27635 214 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 SMARCA1P28370 1054 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 NPTX2P47972 431 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 EIF2B2P49770 351 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 ITKQ08881 620 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 C15orf59Q2T9L4 293 aaPredicted RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 PPM1JQ5JR12 505 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 USP50Q70EL3 339 aaPredicted RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 DHDDSQ86SQ9 333 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 GPD1LQ8N335 351 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 ELMO1Q92556 727 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 DEFB129Q9H1M3 183 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 EPS15L1Q9UBC2 864 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 NAV1Q8NEY1 1877 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 FOCADQ5VW36 1801 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 TCRBV9S1A1TA0A576 114 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 AP3B1O00203 1094 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 CES2O00748 559 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 C2CD2LO14523 706 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 TMCC1O94876 653 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 POLR2BP30876 1174 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 RPL22P35268 128 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 JAM2P57087 298 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 NME3Q13232 169 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 MAP1SQ66K74 1059 aaPredicted RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 ANKRD23Q86SG2 305 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 ZCCHC9Q8N567 271 aaKnown RBP9.12□□□□□ -0.95
RTN4-206ENST00000394611 IL31RAQ8NI17 732 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 CHURC1Q8WUH1 139 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 NAT14Q8WUY8 206 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 SLC7A3Q8WY07 619 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 IWS1Q96ST2 819 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 SPATA16Q9BXB7 569 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 EPS8L2Q9H6S3 715 aa9.12□□□□□ -0.95
RTN4-206ENST00000394611 ATP6AP2A0A1C7CYW4 349 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ESYT2A0FGR8 921 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 FAM149AA5PLN7 773 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ADCY6O43306 1168 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 MAN1A2O60476 641 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ATP6AP2O75787 350 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TPH1P17752 444 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 VCLP18206 1134 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 SLC1A1P43005 524 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TRMT5Q32P41 509 aaKnown RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 FUT11Q495W5 492 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TFDP3Q5H9I0 405 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 PITRM1Q5JRX3 1037 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 OTUD3Q5T2D3 398 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 BNIPLQ7Z465 357 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 BHLHE22Q8NFJ8 381 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ING2Q9H160 280 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 FBXO40Q9UH90 709 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ZNF229Q9UJW7 825 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 SLC39A10Q9ULF5 831 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ARHGEF37A1IGU5 675 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TSPAN3O60637 253 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 S100BP04271 92 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 FGFR1P11362 822 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 SHMT1P34896 483 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 PCYT1AP49585 367 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 POU5F1Q01860 360 aaKnown RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 PARP6Q2NL67 630 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 MFSD5Q6N075 450 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 C1orf186Q6ZWK4 172 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 OTOP1Q7RTM1 612 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 ZNF713Q8N859 430 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 KLHL23Q8NBE8 558 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 DCPSQ96C86 337 aaKnown RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 PANX3Q96QZ0 392 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms