RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZMIZ2Q8NF64 920 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 MAML1Q92585 1016 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 TSPAN18Q96SJ8 248 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 SYT15Q9BQS2 421 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 FOXP3Q9BZS1 431 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 LRRC4Q9HBW1 653 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 RAB6BQ9NRW1 208 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 FYNP06241 537 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 DRD4P21917 467 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 STIP1P31948 543 aaKnown RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 YWHAZP63104 245 aaKnown RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 DPYSL2Q16555 572 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 UPP1Q16831 310 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 TAOK1Q7L7X3 1001 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 PCGF5Q86SE9 256 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 AGGF1Q8N302 714 aaeCLIP15.67■□□□□ 0.14e-13■■□□□ 11.7
GPC3-202ENST00000394299 GDAP1Q8TB36 358 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 PYROXD1Q8WU10 500 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 ZNF317Q96PQ6 595 aaPredicted RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 CSPG4P5Q96PW8 444 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 CCDC77Q9BR77 488 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 STMN4Q9H169 189 aaPredicted RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 CHST12Q9NRB3 414 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 SLC38A7Q9NVC3 462 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 YJEFN3A6XGL0 299 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 E7ENQ6 273 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 CDH16O75309 829 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 SPAG7O75391 227 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 AP1G2O75843 785 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 B3GAT3O94766 335 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 ITGB1P05556 798 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 ARL4CP56559 192 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 PKN2Q16513 984 aaKnown RBP15.66■□□□□ 0.1
GPC3-202ENST00000394299 EFHC1Q5JVL4 640 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 C3orf62Q6ZUJ4 267 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 CPLX4Q7Z7G2 160 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 TAX1BP1Q86VP1 789 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 LRRC34Q8IZ02 419 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 CENPTQ96BT3 561 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 FAF2Q96CS3 445 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 TMEM209Q96SK2 561 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 RTP3Q9BQQ7 232 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 TMEM51Q9NW97 253 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 CHMP2BQ9UQN3 213 aa15.66■□□□□ 0.1
GPC3-202ENST00000394299 M0QYT0 321 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 MYO1CO00159 1063 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ABHD2P08910 425 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 USP17L7P0C7H9 530 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 YY1P25490 414 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ITGA7Q13683 1181 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 SLC25A52Q3SY17 297 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 CD300LGQ6UXG3 332 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 TP53INP2Q8IXH6 220 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 CHMP6Q96FZ7 201 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ZNF670Q9BS34 389 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ANLNQ9NQW6 1124 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 LGALS13Q9UHV8 139 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 GIT1Q9Y2X7 761 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 A0A1W2PPM1 405 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 RASA4BC9J798 803 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 RASA4O43374 803 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ZBED1O96006 694 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 SLC8A3P57103 927 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 MRPL10Q7Z7H8 261 aaKnown RBP15.65■□□□□ 0.1
GPC3-202ENST00000394299 FAM35AQ86V20 835 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 SIX6OS1Q8N1H7 587 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 PIGVQ9NUD9 493 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 TMLHEQ9NVH6 421 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 ZMYND8Q9ULU4 1186 aaPredicted RBP15.65■□□□□ 0.1
GPC3-202ENST00000394299 FZD10Q9ULW2 581 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 NOD1Q9Y239 953 aa15.65■□□□□ 0.1
GPC3-202ENST00000394299 I6L893 689 aaPredicted RBP15.64■□□□□ 0.09
GPC3-202ENST00000394299 METTL18O95568 372 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 DESP17661 470 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 TGM2P21980 687 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 ELK3P41970 407 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 SP3Q02447 781 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 IFT88Q13099 833 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 KCNJ11Q14654 390 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 KCNT2Q6UVM3 1135 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 C10orf67Q8IYJ2 551 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 FBF1Q8TES7 1133 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 TTC25Q96NG3 672 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 ETNK1Q9HBU6 452 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 CYLDQ9NQC7 956 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 FAM72CH0Y354 149 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 CREB3O43889 395 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 DSC3Q14574 896 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 FAM72AQ5TYM5 149 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 FAM72DQ6L9T8 149 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 ARCQ7LC44 396 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 STRADAQ7RTN6 431 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 FAM72BQ86X60 149 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 PALM2Q8IXS6 379 aa15.64■□□□□ 0.09
GPC3-202ENST00000394299 HACE1Q8IYU2 909 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms