RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 NDRG1Q92597 394 aaKnown RBP20.31■□□□□ 0.84
RCCD1-201ENST00000394258 FAM111AQ96PZ2 611 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 PAK5Q9P286 719 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 A0A0G2JND7 137 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 CXorf49A8MYA2 514 aaPredicted RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 BTBD19C9JJ37 291 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 ALDH3A1P30838 453 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 TTC17Q96AE7 1141 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 PRR11Q96HE9 360 aaPredicted RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 LRMDAQ9H2I8 198 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 MANSC1Q9H8J5 431 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 GOLGA2P5Q9HBQ8 144 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 FETUBQ9UGM5 382 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 CYP2F1P24903 491 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 SLC10A2Q12908 348 aaPredicted RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 BIRC2Q13490 618 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 TBC1D10AQ9BXI6 508 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 PHACTR1Q9C0D0 580 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 ETNK2Q9NVF9 386 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 ZC3H7BQ9UGR2 993 aaKnown RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 MFHAS1Q9Y4C4 1052 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 COL1A2P08123 1366 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 CHADO15335 359 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 UGT1A9O60656 530 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 DCTN3O75935 186 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 RECQL4O94761 1208 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 GM2AP17900 193 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 CCND1P24385 295 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 SLC27A1Q6PCB7 646 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 LONP2Q86WA8 852 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 SLC44A1Q8WWI5 657 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 LENG1Q96BZ8 264 aaPredicted RBP20.3■□□□□ 0.84
RCCD1-201ENST00000394258 SNX27Q96L92 541 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 NRDE2Q9H7Z3 1164 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 UGT1A7Q9HAW7 530 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 UGT1A10Q9HAW8 530 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 UGT1A8Q9HAW9 530 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 ZFP69BQ9UJL9 534 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 MAD1L1Q9Y6D9 718 aa20.3■□□□□ 0.84
RCCD1-201ENST00000394258 PLXNA1Q9UIW2 1896 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 IQANK1A0A1B0GTG1 560 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 SMAPO00193 183 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 STAU1O95793 577 aaKnown RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 STILQ15468 1287 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 DGKDQ16760 1214 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 CAND1Q86VP6 1230 aaKnown RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 ADAMTS10Q9H324 1103 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 SYNJ2BP-COX16A0A087WUM0 186 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 METTL18O95568 372 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 BGNP21810 368 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 GRIA1P42261 906 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 CCL15Q16663 113 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 LDLRAD1Q5T700 205 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 CDHR3Q6ZTQ4 885 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 NT5DC4Q86YG4 428 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 PYROXD2Q8N2H3 581 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 TTC39CQ8N584 583 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 BEST2Q8NFU1 509 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 EMID1Q96A84 441 aaPredicted RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 GCOM2Q9BZD3 368 aaPredicted RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 KLC2Q9H0B6 622 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 SSU72Q9NP77 194 aaKnown RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 NOP53Q9NZM5 478 aaKnown RBP20.29■□□□□ 0.84
RCCD1-201ENST00000394258 COX16Q9P0S2 106 aa20.29■□□□□ 0.84
RCCD1-201ENST00000394258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 RBM47A0AV96 593 aaKnown RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 SPTLC1O15269 473 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 TGM2P21980 687 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 DCAF4L1Q3SXM0 396 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 DUSP28Q4G0W2 176 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 C9orf57Q5W0N0 161 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 SLC9A4Q6AI14 798 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 ZNF410Q86VK4 478 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 MAB21L3Q8N8X9 362 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 FAM13CQ8NE31 585 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 A6NJR5 290 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 TRIM49D1C9J1S8 452 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 DPYSL4O14531 572 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 L1CAMP32004 1257 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 BMPR2Q13873 1038 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 FYB2Q5VWT5 728 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 GPR142Q7Z601 462 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 ZNF483Q8TF39 744 aaPredicted RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 MAML3Q96JK9 1138 aa20.28■□□□□ 0.84
RCCD1-201ENST00000394258 RAB3IPQ96QF0 476 aaPredicted RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 PIH1D1Q9NWS0 290 aaKnown RBP20.28■□□□□ 0.84
RCCD1-201ENST00000394258 TM9SF1O15321 606 aa20.27■□□□□ 0.84
RCCD1-201ENST00000394258 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
RCCD1-201ENST00000394258 SLC8A3P57103 927 aa20.27■□□□□ 0.84
RCCD1-201ENST00000394258 SMAD1Q15797 465 aaKnown RBP20.27■□□□□ 0.84
RCCD1-201ENST00000394258 ZBTB6Q15916 424 aa20.27■□□□□ 0.84
RCCD1-201ENST00000394258 CLNKQ7Z7G1 428 aa20.27■□□□□ 0.84
RCCD1-201ENST00000394258 MPP5Q8N3R9 675 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms