RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MFHAS1Q9Y4C4 1052 aa19.84■□□□□ 0.77
CLDND1-203ENST00000394181 TMEM189-UBE2V1I3L0A0 370 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 FBXO21O94952 628 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 COL6A1P12109 1028 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 DESP17661 470 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 PAX3P23760 479 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 SLC11A1P49279 550 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 PGFP49763 221 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 DPYSL2Q16555 572 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.83■□□□□ 0.77
CLDND1-203ENST00000394181 TMEM173Q86WV6 379 aaPredicted RBP19.83■□□□□ 0.77
CLDND1-203ENST00000394181 FAM71DQ8N9W8 422 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 TTC13Q8NBP0 860 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 UHMK1Q8TAS1 419 aaKnown RBP19.83■□□□□ 0.77
CLDND1-203ENST00000394181 SLC7A14Q8TBB6 771 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 CRISPLD2Q9H0B8 497 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 HEY1Q9Y5J3 304 aa19.83■□□□□ 0.77
CLDND1-203ENST00000394181 I6L893 689 aaPredicted RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 OAZ2O95190 189 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 RBP3P10745 1247 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 NCAM1P13591 858 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 IFRD2Q12894 506 aaPredicted RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 SPATA2LQ8IUW3 424 aaPredicted RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 SH2D3CQ8N5H7 860 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 VWCEQ96DN2 955 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 FAM204AQ9H8W3 233 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 DMAP1Q9NPF5 467 aaPredicted RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 MARCH5Q9NX47 278 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 CWC15Q9P013 229 aaKnown RBP19.83■□□□□ 0.76
CLDND1-203ENST00000394181 ADAM21Q9UKJ8 722 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 FZD10Q9ULW2 581 aa19.83■□□□□ 0.76
CLDND1-203ENST00000394181 CAPN9O14815 690 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 OPA1O60313 960 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 CAPN15O75808 1086 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 LTFP02788 710 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 MTMR3Q13615 1198 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 SLC29A2Q14542 456 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 VARS2Q5ST30 1063 aaKnown RBP19.82■□□□□ 0.76
CLDND1-203ENST00000394181 FAM171A1Q5VUB5 890 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 P3H4Q92791 437 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 FAF2Q96CS3 445 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 PABPC3Q9H361 631 aaKnown RBP19.82■□□□□ 0.76
CLDND1-203ENST00000394181 ETNK2Q9NVF9 386 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 ADAM28Q9UKQ2 775 aa19.82■□□□□ 0.76
CLDND1-203ENST00000394181 TBKBP1A7MCY6 615 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 DCDC2CA8MYV0 355 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 UPP2O95045 317 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 CXCL10P02778 98 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 GOT1P17174 413 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 DEUP1Q05D60 604 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 SLC10A2Q12908 348 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-203ENST00000394181 TFDP2Q14188 446 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 NOMO1Q15155 1222 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 SDHAF4Q5VUM1 108 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 SLC9A4Q6AI14 798 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 HIBCHQ6NVY1 386 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-203ENST00000394181 NETO2Q8NC67 525 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 APBB2Q92870 758 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 PGLYRP2Q96PD5 576 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 CSPG4P5Q96PW8 444 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 ABI2Q9NYB9 513 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-203ENST00000394181 APOL1O14791 398 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 GRIK1P39086 918 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 GPR15P49685 360 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 TERF2Q15554 542 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 PM20D1Q6GTS8 502 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 TAS1R1Q7RTX1 841 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 GOLGA6L1Q8N7Z2 621 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 BCL7CQ8WUZ0 217 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-203ENST00000394181 NCAPGQ9BPX3 1015 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 ZNF670Q9BS34 389 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 ZCWPW1Q9H0M4 648 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 ATP11BQ9Y2G3 1177 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 TTC3P53804 2025 aa19.81■□□□□ 0.76
CLDND1-203ENST00000394181 MCF2LO15068 1137 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 ALDH2P05091 517 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 RARGP13631 454 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 AMPD1P23109 780 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 RDXP35241 583 aaKnown RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 RPL22P35268 128 aaKnown RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 GBE1Q04446 702 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 BSPRYQ5W0U4 402 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 DARS2Q6PI48 645 aaKnown RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 LRIG3Q6UXM1 1119 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 TTC9BQ8N6N2 239 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 RSAD2Q8WXG1 361 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 WDR6Q9NNW5 1121 aaKnown RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 STAP1Q9ULZ2 295 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 USP3Q9Y6I4 520 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 DNALI1O14645 258 aaPredicted RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 GAD2Q05329 585 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 MAPRE1Q15691 268 aaKnown RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 RSPO2Q6UXX9 243 aaPredicted RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 NPAS4Q8IUM7 802 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 SCN4BQ8IWT1 228 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 ZNF333Q96JL9 665 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 FRMD8P1Q9BZ68 369 aaPredicted RBP19.8■□□□□ 0.76
CLDND1-203ENST00000394181 CENPHQ9H3R5 247 aa19.8■□□□□ 0.76
CLDND1-203ENST00000394181 PCDH9Q9HC56 1237 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms