RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 PLA2G4CQ9UP65 541 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 B2RBV5 119 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 NDC80O14777 642 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 B4GALT5O43286 388 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 UQCRBP14927 111 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 ALDH16A1Q8IZ83 802 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 OR6Y1Q8NGX8 325 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 ALKBH8Q96BT7 664 aaKnown RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 OXNAD1Q96HP4 312 aaPredicted RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 ZBTB45Q96K62 511 aaPredicted RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 TSSK1BQ9BXA7 367 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 SSX2IPQ9Y2D8 614 aa11.57□□□□□ -0.56
CUX1-204ENST00000393824 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
CUX1-204ENST00000393824 SCN10AQ9Y5Y9 1956 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 A0A0J9YVX5 310 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 CAPN14A8MX76 684 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 FCHO1O14526 889 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 ALOX15BO15296 676 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 OPHN1O60890 802 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 ZNF189O75820 626 aaPredicted RBP11.56□□□□□ -0.56
CUX1-204ENST00000393824 CIB2O75838 187 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 GJA8P48165 433 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 LBX1P52954 281 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 PPP3CAQ08209 521 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.56□□□□□ -0.56
CUX1-204ENST00000393824 EFHC2Q5JST6 749 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 ZNF484Q5JVG2 852 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 MAP4K3Q8IVH8 894 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 TRIM11Q96F44 468 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 AGAP3Q96P47 875 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 ST6GALNAC4Q9H4F1 302 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 GINS2Q9Y248 185 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
CUX1-204ENST00000393824 A0A087WZ62 844 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 MBLAC1A4D2B0 266 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 GOLGA8IPA6NC78 632 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 GOLGA8JA6NMD2 632 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 HOXC8P31273 242 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 NAMPTP43490 491 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 GEMIN4P57678 1058 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 NKX3-2P78367 333 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 PRKD1Q15139 912 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 SEPT7Q16181 437 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 KIZQ2M2Z5 673 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 P3H1Q32P28 736 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 ZBTB41Q5SVQ8 909 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 IER5Q5VY09 327 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 GDF6Q6KF10 455 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 KYAT3Q6YP21 454 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 B3GNT6Q6ZMB0 384 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 SATL1Q86VE3 508 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 CHSY1Q86X52 802 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 TCP10LQ8TDR4 215 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 NMD3Q96D46 503 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 TTC1Q99614 292 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 FDXACB1Q9BRP7 624 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 SLC7A8Q9UHI5 535 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 PPM1HQ9ULR3 514 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 CHMP2BQ9UQN3 213 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 WDR37Q9Y2I8 494 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 DNALI1O14645 258 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 DHRS4L1P0CG22 281 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 CYP11B1P15538 503 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 MXI1P50539 228 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 DNAL1Q4LDG9 190 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 SEZ6Q53EL9 994 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 RFX8Q6ZV50 586 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 TTC7BQ86TV6 843 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 ULK2Q8IYT8 1036 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 BANPQ8N9N5 519 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 RBM15BQ8NDT2 890 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 FAM172AQ8WUF8 416 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 TMEM40Q8WWA1 233 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 C1orf21Q9H246 121 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
CUX1-204ENST00000393824 TIMMDC1Q9NPL8 285 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 AKT3Q9Y243 479 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
CUX1-204ENST00000393824 WDR91A4D1P6 747 aa11.54□□□□□ -0.56
CUX1-204ENST00000393824 HNRNPDLO14979 420 aaKnown RBP11.54□□□□□ -0.56
CUX1-204ENST00000393824 VILLO15195 856 aa11.54□□□□□ -0.56
CUX1-204ENST00000393824 CYP26A1O43174 497 aa11.54□□□□□ -0.56
CUX1-204ENST00000393824 MSCO60682 206 aa11.54□□□□□ -0.56
CUX1-204ENST00000393824 E2F6O75461 281 aa11.54□□□□□ -0.56
CUX1-204ENST00000393824 BAG2O95816 211 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms