RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ZCCHC9Q8N567 271 aaKnown RBP23.09■■□□□ 1.29
HMGA2-203ENST00000393578 TMEM209Q96SK2 561 aa23.09■■□□□ 1.29
HMGA2-203ENST00000393578 MTMR10Q9NXD2 777 aa23.09■■□□□ 1.29
HMGA2-203ENST00000393578 FZD10Q9ULW2 581 aa23.09■■□□□ 1.29
HMGA2-203ENST00000393578 M0QYT0 321 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 CAPN9O14815 690 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 PQBP1O60828 265 aaKnown RBP23.08■■□□□ 1.29
HMGA2-203ENST00000393578 GDF10P55107 478 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 ROR1Q01973 937 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 PCGF5Q86SE9 256 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 FAM131BQ86XD5 332 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 RELL1Q8IUW5 271 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 IRGQQ8WZA9 623 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 CDC42EP4Q9H3Q1 356 aaKnown RBP23.08■■□□□ 1.29
HMGA2-203ENST00000393578 NRDE2Q9H7Z3 1164 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 PRDM10Q9NQV6 1147 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 DNAJB4Q9UDY4 337 aa23.08■■□□□ 1.29
HMGA2-203ENST00000393578 OAZ2O95190 189 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 ZFXP17010 805 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 CYP2F1P24903 491 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 PM20D1Q6GTS8 502 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 C1orf228Q6PIY5 440 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 C4orf50Q6ZRC1 276 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 UNC45BQ8IWX7 931 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 SCML4Q8N228 414 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 C10orf88Q9H8K7 445 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 RRN3Q9NYV6 651 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 RCOR3Q9P2K3 495 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 NAALADL1Q9UQQ1 740 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 LTFP02788 710 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 SHBGP04278 402 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 PITX1P78337 314 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 KRT71Q3SY84 523 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 RNASEH2BQ5TBB1 312 aaKnown RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 DARS2Q6PI48 645 aaKnown RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 HOOK3Q86VS8 718 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 FAM71DQ8N9W8 422 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 KCTD15Q96SI1 283 aaPredicted RBP23.07■■□□□ 1.28
HMGA2-203ENST00000393578 SLC9A7Q96T83 725 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 CENPHQ9H3R5 247 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 SHOC2Q9UQ13 582 aa23.07■■□□□ 1.28
HMGA2-203ENST00000393578 DEUP1Q05D60 604 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 BHLHA9Q7RTU4 235 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 CROCCP2Q86T23 111 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 ZC3H18Q86VM9 953 aaKnown RBP23.06■■□□□ 1.28
HMGA2-203ENST00000393578 SPATA2LQ8IUW3 424 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-203ENST00000393578 SH2D3CQ8N5H7 860 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 CSPG4P5Q96PW8 444 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 PRDM16Q9HAZ2 1276 aa23.06■■□□□ 1.28
HMGA2-203ENST00000393578 PRG3Q9Y2Y8 225 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-203ENST00000393578 TADA2AO75478 443 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 TTC4O95801 387 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 AIF1P55008 147 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 AGBL2Q5U5Z8 902 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 ANKRD33Q7Z3H0 272 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 PGAP3Q96FM1 320 aaPredicted RBP23.05■■□□□ 1.28
HMGA2-203ENST00000393578 CASD1Q96PB1 797 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 TMEM109Q9BVC6 243 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 LRFN2Q9ULH4 789 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 HEY1Q9Y5J3 304 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 H7C0C1 242 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 NCAM1P13591 858 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 RPL22P35268 128 aaKnown RBP23.05■■□□□ 1.28
HMGA2-203ENST00000393578 ARL4AP40617 200 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 ATP5OP48047 213 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 NR2C2P49116 596 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 NME3Q13232 169 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 SLC7A14Q8TBB6 771 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 PWWP2AQ96N64 755 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 RBM15Q96T37 977 aaKnown RBP eCLIP23.05■■□□□ 1.28
HMGA2-203ENST00000393578 MAGEB5Q9BZ81 275 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 PIGVQ9NUD9 493 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 CWC15Q9P013 229 aaKnown RBP23.05■■□□□ 1.28
HMGA2-203ENST00000393578 USP3Q9Y6I4 520 aa23.05■■□□□ 1.28
HMGA2-203ENST00000393578 PTPRDP23468 1912 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 CFAP69A5D8W1 941 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 SYN3O14994 580 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 UBAP2Q5T6F2 1119 aaKnown RBP23.04■■□□□ 1.28
HMGA2-203ENST00000393578 EMC10Q5UCC4 262 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 ZCWPW1Q9H0M4 648 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-203ENST00000393578 FARP1Q9Y4F1 1045 aaPredicted RBP23.04■■□□□ 1.28
HMGA2-203ENST00000393578 NLRC5Q86WI3 1866 aa23.04■■□□□ 1.28
HMGA2-203ENST00000393578 SYNJ2BP-COX16A0A087WUM0 186 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 HOXA2O43364 376 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 PARNO95453 639 aaKnown RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 PPIL6Q8IXY8 311 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 DCP1BQ8IZD4 617 aaKnown RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 CRIPAKQ8N1N5 446 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 TRIM62Q9BVG3 475 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 HIPK3Q9H422 1215 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 USP29Q9HBJ7 922 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 DNAJC17Q9NVM6 304 aaKnown RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 COX16Q9P0S2 106 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 ADAM28Q9UKQ2 775 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 BCLAF3A2AJT9 711 aaKnown RBP23.03■■□□□ 1.28
HMGA2-203ENST00000393578 F9P00740 461 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 GOT1P17174 413 aa23.03■■□□□ 1.28
HMGA2-203ENST00000393578 SLC39A12Q504Y0 691 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms