RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 SYPL2Q5VXT5 272 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 PM20D1Q6GTS8 502 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 HIBCHQ6NVY1 386 aaPredicted RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 SPATA2LQ8IUW3 424 aaPredicted RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 CRIPAKQ8N1N5 446 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 CCDC185Q8N715 623 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 PCDH19Q8TAB3 1148 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 ZCWPW1Q9H0M4 648 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 EPB41L4BQ9H329 900 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 AAASQ9NRG9 546 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 MTMR10Q9NXD2 777 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 PATJQ8NI35 1801 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 KIAA0100Q14667 2235 aaKnown RBP22.21■■□□□ 1.15
SPHK1-202ENST00000392496 M0QYT0 321 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 CAPN9O14815 690 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 LTFP02788 710 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 RBP3P10745 1247 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 FAAP100Q0VG06 881 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 PPP6R3Q5H9R7 873 aaPredicted RBP22.21■■□□□ 1.15
SPHK1-202ENST00000392496 CEP85LQ5SZL2 805 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 BHLHA9Q7RTU4 235 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 PRUNE1Q86TP1 453 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 NPAS4Q8IUM7 802 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 DCP1BQ8IZD4 617 aaKnown RBP22.21■■□□□ 1.15
SPHK1-202ENST00000392496 TNS4Q8IZW8 715 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 PLD5Q8N7P1 536 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 RSAD2Q8WXG1 361 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 ARL8AQ96BM9 186 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 SCLYQ96I15 445 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 KCTD15Q96SI1 283 aaPredicted RBP22.21■■□□□ 1.15
SPHK1-202ENST00000392496 PRDM16Q9HAZ2 1276 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 RCOR3Q9P2K3 495 aaPredicted RBP22.21■■□□□ 1.15
SPHK1-202ENST00000392496 NAALADL1Q9UQQ1 740 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 USP3Q9Y6I4 520 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 TET1Q8NFU7 2136 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 SCN5AQ14524 2016 aa22.21■■□□□ 1.15
SPHK1-202ENST00000392496 COL4A4P53420 1690 aaPredicted RBP22.2■■□□□ 1.15
SPHK1-202ENST00000392496 ETS1P14921 441 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ZFXP17010 805 aaPredicted RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 BCAR1P56945 870 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 PITX1P78337 314 aaPredicted RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 DEUP1Q05D60 604 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 GPS1Q13098 491 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 C1orf53Q5VUE5 145 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 CEP128Q6ZU80 1094 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 TRMT10CQ7L0Y3 403 aaKnown RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 FAM131BQ86XD5 332 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 SLC9A7Q96T83 725 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 COLEC11Q9BWP8 271 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 MRPL9Q9BYD2 267 aaKnown RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ADAM28Q9UKQ2 775 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 TPX2Q9ULW0 747 aaKnown RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 GOLGA6CA6NDK9 693 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ZSCAN5DPP0CG00 497 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 GOLGA6DP0CG33 693 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 CYP2F1P24903 491 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 STIP1P31948 543 aaKnown RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 AIF1P55008 147 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ZNF844Q08AG5 666 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 TERF2Q15554 542 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 TTMPQ5BVD1 217 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 DENND2CQ68D51 928 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 NPNTQ6UXI9 565 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 PGAP3Q96FM1 320 aaPredicted RBP22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ADAM7Q9H2U9 754 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 SEMA4AQ9H3S1 761 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 FAM204AQ9H8W3 233 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 TMBIM4Q9HC24 238 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 GOLGA6AQ9NYA3 693 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 ADAM21Q9UKJ8 722 aa22.2■■□□□ 1.14
SPHK1-202ENST00000392496 GOLGA6L10A6NI86 522 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 IFNB1P01574 187 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 ALDH2P05091 517 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 CHKAP35790 457 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 CCL23P55773 120 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 ROR1Q01973 937 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 TLE2Q04725 743 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 BEND5Q7L4P6 421 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 CCDC25Q86WR0 208 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 OR2W6PQ8NHA6 318 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 ABHD8Q96I13 439 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 TMEM175Q9BSA9 504 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 TRIM62Q9BVG3 475 aa22.19■■□□□ 1.14
SPHK1-202ENST00000392496 GATMP50440 423 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 GYS2P54840 703 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 GDF10P55107 478 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 MORF4L2Q15014 288 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 NFE2Q16621 373 aaPredicted RBP22.18■■□□□ 1.14
SPHK1-202ENST00000392496 C1orf228Q6PIY5 440 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 PCGF5Q86SE9 256 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 UNC45BQ8IWX7 931 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 SLC7A14Q8TBB6 771 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 NTAN1Q96AB6 310 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 CSPG4P5Q96PW8 444 aa22.18■■□□□ 1.14
SPHK1-202ENST00000392496 RIPK2O43353 540 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 MYZAPP0CAP1 466 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 NCAM1P13591 858 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 ARL4AP40617 200 aa22.17■■□□□ 1.14
SPHK1-202ENST00000392496 MRPL58Q14197 206 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms