RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MTMR10Q9NXD2 777 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 H0YGN5 161 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 M0QYT0 321 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 SGK1O00141 431 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 NDC80O14777 642 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 APOL1O14791 398 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 FGFR3P22607 806 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC11A1P49279 550 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PMS2P54278 862 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 AIF1P55008 147 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PITX1P78337 314 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 NFE2Q16621 373 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PPP6R3Q5H9R7 873 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 BEND5Q7L4P6 421 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM131BQ86XD5 332 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PLD5Q8N7P1 536 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 ANKLE1Q8NAG6 615 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 GLIS1Q8NBF1 620 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 DIS3LQ8TF46 1054 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 UBLCP1Q8WVY7 318 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 RIN2Q8WYP3 895 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 P3H4Q92791 437 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 RCOR3Q9P2K3 495 aaPredicted RBP11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 ANAPC5Q9UJX4 755 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAN1Q9Y2M0 1017 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 NFS1Q9Y697 457 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 LTBP2Q14767 1821 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 MYO16Q9Y6X6 1858 aa11.91□□□□□ -0.5
SMARCAL1-203ENST00000392128 SF3B1O75533 1304 aaKnown RBP eCLIP11.9□□□□□ -0.51e-8■■■■■ 103.4
SMARCAL1-203ENST00000392128 TBKBP1A7MCY6 615 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 RNF40O75150 1001 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 RARGP13631 454 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 CYP2F1P24903 491 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 VPS41P49754 854 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 ELAVL2Q12926 359 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC39A12Q504Y0 691 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 IZUMO3Q5VZ72 239 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 GOLGA6L1Q8N7Z2 621 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 KCTD15Q96SI1 283 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 PABPC3Q9H361 631 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 PLXNA3P51805 1871 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 OR6C75A6NL08 312 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 DNALI1O14645 258 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 TNFRSF10BO14763 440 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 POLR3GO15318 223 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 GALTP07902 379 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 OR4Q2P0C623 313 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 RBP3P10745 1247 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 NCAM1P13591 858 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZFXP17010 805 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 RFC2P35250 354 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 GJA8P48165 433 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 BCAR1P56945 870 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 P3H1Q32P28 736 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM171A1Q5VUB5 890 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZNF280DQ6N043 979 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 HIBCHQ6NVY1 386 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 CNKSR3Q6P9H4 555 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC7A14Q8TBB6 771 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 NTAN1Q96AB6 310 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 GPR62Q9BZJ7 368 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 FOXP3Q9BZS1 431 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 EPB41L4BQ9H329 900 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 PIGVQ9NUD9 493 aa11.9□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZSCAN5DPP0CG00 497 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ETS1P14921 441 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 GRIK1P39086 918 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 SLC5A3P53794 718 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 SCAPQ12770 1279 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 IKBKEQ14164 716 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 CTXN3Q4LDR2 81 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 VSTM1Q6UX27 236 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 NPNTQ6UXI9 565 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 RSAD2Q8WXG1 361 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 CSPG4P5Q96PW8 444 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ADAM7Q9H2U9 754 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 WDR6Q9NNW5 1121 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 F9P00740 461 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 CLTBP09497 229 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 NUDT17P0C025 328 aa11.89□□□□□ -0.51
SMARCAL1-203ENST00000392128 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms