RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 AK5Q9Y6K8 562 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 DDTLA6NHG4 134 aaPredicted RBP20.27■□□□□ 0.84
SHANK1-203ENST00000391813 EEF2KO00418 725 aaKnown RBP20.27■□□□□ 0.84
SHANK1-203ENST00000391813 TRIM24O15164 1050 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 PROCP04070 461 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 TJAP1Q5JTD0 557 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 RNF149Q8NC42 400 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 RNF217Q8TC41 542 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 SIK2Q9H0K1 926 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 REXO2Q9Y3B8 237 aaKnown RBP20.27■□□□□ 0.84
SHANK1-203ENST00000391813 GAS2O43903 313 aaKnown RBP20.27■□□□□ 0.84
SHANK1-203ENST00000391813 RGS7P49802 495 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 CDK7P50613 346 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 RGS21Q2M5E4 152 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 STKLD1Q8NE28 680 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 CCDC78A2IDD5 438 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 MSH4O15457 936 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 IL18RAPO95256 599 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 QPCTQ16769 361 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 PRMT9Q6P2P2 845 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 ARRDC4Q8NCT1 418 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 SPATA20Q8TB22 786 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 CYLDQ9NQC7 956 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 PRDM5Q9NQX1 630 aaPredicted RBP20.27■□□□□ 0.83
SHANK1-203ENST00000391813 SYNPO2Q9UMS6 1093 aa20.27■□□□□ 0.83
SHANK1-203ENST00000391813 PRR23D1E9PI22 279 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-203ENST00000391813 DFFAO00273 331 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 PRR23D2P0DMB1 279 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-203ENST00000391813 ELK3P41970 407 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 PPATQ06203 517 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 MGAT5Q09328 741 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 TRPC4APQ8TEL6 797 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 PYDC1Q8WXC3 89 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 BDH2Q9BUT1 245 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 C9orf16Q9BUW7 83 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 TUBGCP4Q9UGJ1 667 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 EARS2Q5JPH6 523 aaKnown RBP20.26■□□□□ 0.83
SHANK1-203ENST00000391813 LRRC8DQ7L1W4 858 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 MCOLN2Q8IZK6 566 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 GPRC5DQ9NZD1 345 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 NPTXRO95502 500 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 C4BPBP20851 252 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 SSTR1P30872 391 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 CCNHP51946 323 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF235Q14590 738 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 TRIM13O60858 407 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 ALDH1A3P47895 512 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 BNIP1Q12981 228 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 BBS7Q8IWZ6 715 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 ATPAF2Q8N5M1 289 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 POU5F2Q8N7G0 328 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 ACSF2Q96CM8 615 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-203ENST00000391813 NMRK1Q9NWW6 199 aa20.26■□□□□ 0.83
SHANK1-203ENST00000391813 MED26O95402 600 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 GARTP22102 1010 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 RPA3P35244 121 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 RSBN1Q5VWQ0 802 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SLC47A2Q86VL8 602 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 DHFR2Q86XF0 187 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 FNIP1Q8TF40 1166 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 IMPAD1Q9NX62 359 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 V9GYQ6 96 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 RGS5O15539 181 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 FOXR2Q6PJQ5 311 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 KLHL23Q8NBE8 558 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 RSPH1Q8WYR4 309 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 ART4Q93070 314 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SH2D3AQ9BRG2 576 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 FBXO28Q9NVF7 368 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SLC8A2Q9UPR5 921 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 PNMA8CA0A1B0GUJ8 204 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 TBKBP1A7MCY6 615 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SUPT7LO94864 414 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CEP78Q5JTW2 689 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 N4BP2L1Q5TBK1 243 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CBWD2Q8IUF1 395 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 UNC45BQ8IWX7 931 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 DHRSXQ8N5I4 330 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 TSPAN14Q8NG11 270 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 KAT2BQ92831 832 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CEP44Q9C0F1 390 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 ACOT9Q9Y305 439 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SLIT3O75094 1523 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 TRDMT1O14717 391 aaKnown RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF263O14978 683 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 UBDO15205 165 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 BMPR2Q13873 1038 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 SNX17Q15036 470 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 MIIPQ5JXC2 388 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CYP4A22Q5TCH4 519 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 BAP1Q92560 729 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 EZH1Q92800 747 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CROTQ9UKG9 612 aa20.25■□□□□ 0.83
SHANK1-203ENST00000391813 CDV3Q9UKY7 258 aaKnown RBP20.25■□□□□ 0.83
SHANK1-203ENST00000391813 VAV1P15498 845 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 TSHRP16473 764 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 DNAAF5Q86Y56 855 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 CDRT15Q96T59 188 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 COQ7Q99807 217 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 GLIS2Q9BZE0 524 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms