RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 FAM81BQ96LP2 452 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 NT5C1BQ96P26 610 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 AGAP3Q96P47 875 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 ACAP3Q96P50 834 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 GCNAQ96QF7 691 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 C11orf70Q9BRQ4 267 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 LXNQ9BS40 222 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PLVAPQ9BX97 442 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 TUT1Q9H6E5 874 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 SUDS3Q9H7L9 328 aaPredicted RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 NRDE2Q9H7Z3 1164 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 C10orf88Q9H8K7 445 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PRDM16Q9HAZ2 1276 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 APOBEC3GQ9HC16 384 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 XAB2Q9HCS7 855 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 CD209Q9NNX6 404 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 GPRC5CQ9NQ84 441 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 DDX18Q9NVP1 670 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 DNAJC28Q9NX36 388 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 DUS2Q9NX74 493 aaKnown RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 MTMR10Q9NXD2 777 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 ARHGEF38Q9NXL2 777 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 C6orf203Q9P0P8 240 aaPredicted RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 NYAP2Q9P242 653 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 IGSF9Q9P2J2 1179 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 VPS28Q9UK41 221 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 BARX2Q9UMQ3 279 aaPredicted RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 LZTS1Q9Y250 596 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF652Q9Y2D9 606 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM98Q9Y2Y6 226 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 TMED5Q9Y3A6 229 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHA1Q9Y5I3 950 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 HEY1Q9Y5J3 304 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 HEMK1Q9Y5R4 338 aaPredicted RBP3.58□□□□□ -1.84
TRAV39-201ENST00000390466 MAD1L1Q9Y6D9 718 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 IVNS1ABPQ9Y6Y0 642 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 CNTNAP2Q9UHC6 1331 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PATJQ8NI35 1801 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 TRPM7Q96QT4 1865 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 DOCK4Q8N1I0 1966 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 OTOFQ9HC10 1997 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 hCG_2014768A0A024R1R8 64 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CCDC195A0A1B0GUA6 201 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GSTTP1A0A1W2PQM5 241 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 RBM47A0AV96 593 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GOLGA8IPA6NC78 632 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GOLGA8JA6NMD2 632 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 H3BNH8 94 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GOLGA8SH3BPF8 625 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 K7ENM7 598 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ACOT8O14734 319 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PLIN3O60664 434 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 DKC1O60832 514 aaKnown RBP eCLIP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 OPHN1O60890 802 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 SPAG6O75602 509 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 LYPLA1O75608 230 aaPredicted RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 STK10O94804 968 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 TNFAIP8O95379 198 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 BMP10O95393 424 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 BAG2O95816 211 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 NDUFB10O96000 172 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CLPTM1O96005 669 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 MT-ND3P03897 115 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 C4BPAP04003 597 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PROCP04070 461 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 KRT1P04264 644 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 SERPINB2P05120 415 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 MYL4P12829 197 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 EEF2P13639 858 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 XRCC1P18887 633 aaPredicted RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GLDCP23378 1020 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PTPRDP23468 1912 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ACAT1P24752 427 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ADORA2AP29274 412 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 HOXA13P31271 388 aaPredicted RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CRHR1P34998 444 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PHBP35232 272 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 GRM5P41594 1212 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ELK3P41970 407 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 HALP42357 657 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PHKA2P46019 1235 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 STT3AP46977 705 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 RXRGP48443 463 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PSMD8P48556 350 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 RARRES1P49788 294 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 IDH3AP50213 366 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CCR3P51677 355 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 NDST2P52849 883 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 THOP1P52888 689 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 NRLP54845 237 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 AQP5P55064 265 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 SNAP25P60880 206 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 TUBA4AP68366 448 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF200P98182 395 aaPredicted RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 OTUD4Q01804 1114 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ZBTB16Q05516 673 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms