RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 DSG3P32926 999 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 NAMPTP43490 491 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 NME5P56597 212 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 AMHR2Q16671 573 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 HMGCRP04035 888 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 TEX13BQ9BXU2 312 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 DMAC2Q9NW81 257 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 MAFGO15525 162 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CETPP11597 493 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 FGFR3P22607 806 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 RPS6KA3P51812 740 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PDK1Q15118 436 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 C15orf59Q2T9L4 293 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPDYAQ5MJ70 313 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 DENND1BQ6P3S1 775 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 DDHD1Q8NEL9 900 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 OR5B17Q8NGF7 314 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 SEPT1Q8WYJ6 367 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 GPRASP2Q96D09 838 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PAIP1Q9H074 479 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 MGAT1P26572 445 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 FOLH1Q04609 750 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 STX5Q13190 355 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PDK2Q15119 407 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PGM5Q15124 567 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CAPN8A6NHC0 703 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 MLH1P40692 756 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 UGCGQ16739 394 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 EML3Q32P44 896 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZACNQ401N2 412 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 LRRC38Q5VT99 294 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CLVS1Q8IUQ0 354 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 EEF2KO00418 725 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 TM7SF2O76062 418 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 NELFEP18615 380 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CYP2F1P24903 491 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 TPP2P29144 1249 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CAP2P40123 477 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ADRM1Q16186 407 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 BBS12Q6ZW61 710 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PHF13Q86YI8 300 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CLEC4FQ8N1N0 589 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 PCYOX1LQ8NBM8 494 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 CPT1BQ92523 772 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ADAM7Q9H2U9 754 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 EML4Q9HC35 981 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZNF229Q9UJW7 825 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
TRAPPC9-201ENST00000389328 GOLGA8TH3BQL2 631 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TPP1O14773 563 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 CNTFP26441 200 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 POU5F1Q01860 360 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 MGAT5Q09328 741 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 DGKDQ16760 1214 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 CSPG5O95196 566 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 MOCS2O96007 188 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 SERPINA6P08185 405 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 FDFT1P37268 417 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 GLIS1Q8NBF1 620 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZFRQ96KR1 1074 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 UBP1Q9NZI7 540 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TSR3Q9UJK0 312 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMEM191CA6NGB0 347 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 USP12O75317 370 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 GFAPP14136 432 aa13.53□□□□□ -0.24
TRAPPC9-201ENST00000389328 ME2P23368 584 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms