RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PLSCR1O15162 318 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 TMPRSS11DO60235 418 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 PMPCBO75439 489 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 ERBB2P04626 1255 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 NR2F6P10588 404 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 EGR2P11161 476 aaPredicted RBP6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 NDUFB7P17568 137 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 ADRA1DP25100 572 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 CNTFP26441 200 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 GKP32189 559 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 AVPR1BP47901 424 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 TXNL4AP83876 142 aaKnown RBP6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 RNASELQ05823 741 aaKnown RBP6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 SLC12A1Q13621 1099 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 TBRG1Q3YBR2 411 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 KAZNQ674X7 775 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 MSANTD2Q6P1R3 559 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 CEP70Q8NHQ1 597 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 CSGALNACT1Q8TDX6 532 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 RILPL2Q969X0 211 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 COG8Q96MW5 612 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 ZHX3Q9H4I2 956 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 SLC2A4RGQ9NR83 387 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 GJD2Q9UKL4 321 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 PNMA2Q9UL42 364 aa6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
RNU6-40P-201ENST00000384254 FAM90A18PA6NE21 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A16PA6NEW6 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A9PA6NNJ1 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A5PA8MXJ8 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 B9A039 149 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 QSOX1O00391 747 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CTIFO43310 598 aaKnown RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 DHHO43323 396 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 EPB41L2O43491 1005 aaKnown RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CBFA2T3O75081 653 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 URI1O94763 535 aaPredicted RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A15PP0C7V4 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A14PP0C7W9 464 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 HKR1P10072 659 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CDK7P50613 346 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 RBM5P52756 815 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM110CQ1W6H9 321 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D25Q3MII6 688 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 ANKRD40Q6AI12 368 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 DPY19L3Q6ZPD9 716 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 PARS2Q7L3T8 475 aaKnown RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 ZNF551Q7Z340 670 aaPredicted RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC44A3Q8N4M1 653 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 IL17REQ8NFR9 667 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 RP9Q8TA86 221 aaKnown RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC22A17Q8WUG5 538 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 TFAP2BQ92481 460 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 MPP4Q96JB8 637 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 PPM1MQ96MI6 270 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 GPR20Q99678 358 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CINPQ9BW66 212 aaPredicted RBP6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CYP4F11Q9HBI6 524 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 G6PC2Q9NQR9 355 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 ARHGEF3Q9NR81 526 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 LRIT1Q9P2V4 623 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 DKK3Q9UBP4 350 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC13A4Q9UKG4 626 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 CRYL1Q9Y2S2 319 aa6.14□□□□□ -1.43
RNU6-40P-201ENST00000384254 A0A1B0GVC2 190 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 CCDC151A5D8V7 595 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 AP4M1O00189 453 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 TTLL1O95922 423 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 POLBP06746 335 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 NPSP0C0P6 89 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 CKMT1AP12532 417 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 THBS4P35443 961 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 MRPS35P82673 323 aaKnown RBP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 E2F1Q01094 437 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 UBE3AQ05086 875 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 MTAPQ13126 283 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 FOXE3Q13461 319 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 TRPC3Q13507 836 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 FHL3Q13643 280 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 KCNJ12Q14500 433 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 ANKRD1Q15327 319 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 CDSNQ15517 529 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 LSM12Q3MHD2 195 aaKnown RBP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 AASDHQ4L235 1098 aaPredicted RBP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 MTHFD1LQ6UB35 978 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 Q6ZNX1 250 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 PTCHD4Q6ZW05 846 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 RHOUQ7L0Q8 258 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 SYT13Q7L8C5 426 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 WDR53Q7Z5U6 358 aaPredicted RBP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 CAVIN3Q969G5 261 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 PRR25Q96S07 402 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 SEC62Q99442 399 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms