RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CNTN1Q12860 1018 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 TOP3AQ13472 1001 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 TTMPQ5BVD1 217 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 AMER2Q8N7J2 671 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 TCP10LQ8TDR4 215 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 UTP15Q8TED0 518 aaKnown RBP12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 NMRK1Q9NWW6 199 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 ABT1Q9ULW3 272 aaKnown RBP12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 ZNF609O15014 1411 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 LRRC7Q96NW7 1537 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 IFNA14P01570 189 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 FAM153BP0C7A2 387 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 CRKP46108 304 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 EFNA5P52803 228 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 ARPC4P59998 168 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 FAM153CQ494X1 144 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 SUN5Q8TC36 379 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 ZNF560Q96MR9 790 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 SEMA6AQ9H2E6 1030 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 ING3Q9NXR8 418 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 MOSPD1Q9UJG1 213 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 DUSP12Q9UNI6 340 aa12.77□□□□□ -0.36
SRGAP3-202ENST00000383836 FGFR3P22607 806 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 CAPZA2P47755 286 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 PGM2Q96G03 612 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 APOL5Q9BWW9 433 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 WFS1O76024 890 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 C8orf59Q8N0T1 100 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 NSMCE2Q96MF7 247 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 LRMDAQ9H2I8 198 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 SMARCAD1Q9H4L7 1026 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 RAD54BQ9Y620 910 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 KCNJ2P63252 427 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 ZSCAN18Q8TBC5 510 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 SPASTQ9UBP0 616 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 FLT1P17948 1338 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 PROCP04070 461 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 DHDDSQ86SQ9 333 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 TATDN2Q93075 761 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 PIF1Q9H611 641 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 ZNF180Q9UJW8 692 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 TBX22Q9Y458 520 aa12.77□□□□□ -0.37
SRGAP3-202ENST00000383836 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 SERPINE1P05121 402 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 MPOP05164 745 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 S100A6P06703 90 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 GRIK1P39086 918 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 MRPS22P82650 360 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TAF5Q15542 800 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 SWSAP1Q6NVH7 229 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 STRA8Q7Z7C7 330 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 LOC100506127A0A0U1RQW1 187 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TWF2Q6IBS0 349 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TRIM74Q86UV6 250 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TRIM73Q86UV7 250 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 KRT78Q8N1N4 520 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 DDX50Q9BQ39 737 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 FUCA2Q9BTY2 467 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 CATSPERBQ9H7T0 1116 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ZFYVE1Q9HBF4 777 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 SERPIND1P05546 499 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 EPHX4Q8IUS5 362 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ETS2P15036 469 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 FASTKQ14296 549 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 TINF2Q9BSI4 451 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 DYRK4Q9NR20 520 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 GALNT8Q9NY28 637 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 CD3EAPO15446 510 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ANPEPP15144 967 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 CENPAP49450 140 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 CASP4P49662 377 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ANXA11P50995 505 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 IFI35P80217 286 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 FIG4Q92562 907 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 DCP1AQ9NPI6 582 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 CSNK2BP67870 215 aa12.76□□□□□ -0.37
SRGAP3-202ENST00000383836 NDUFAF6Q330K2 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms