RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 RIBC1Q8N443 379 aaPredicted RBP12.95□□□□□ -0.34
CDX2-201ENST00000381020 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 STAMBPO95630 424 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 GPD2P43304 727 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 BRCC3P46736 316 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 ATN1P54259 1190 aaPredicted RBP12.95□□□□□ -0.34
CDX2-201ENST00000381020 CDCA2Q69YH5 1023 aaPredicted RBP12.95□□□□□ -0.34
CDX2-201ENST00000381020 ITPRIPL1Q6GPH6 555 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 DPY19L2P1Q6NXN4 242 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 UBXN6Q9BZV1 441 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 PHTF1Q9UMS5 762 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 DRG1Q9Y295 367 aaKnown RBP12.95□□□□□ -0.34
CDX2-201ENST00000381020 IGKV6D-21A0A0A0MT36 114 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 CNMDO75829 334 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 TPH1P17752 444 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 AXLP30530 894 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 LHX1P48742 406 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 GBE1Q04446 702 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 CCNYL1Q8N7R7 359 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 SOCS4Q8WXH5 440 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 XYLT2Q9H1B5 865 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 KAT6AQ92794 2004 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 SMIM35A0A1B0GVV1 85 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 C3orf70A6NLC5 250 aaPredicted RBP12.94□□□□□ -0.34
CDX2-201ENST00000381020 APOEP02649 317 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ITGAVP06756 1048 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 GDF10P55107 478 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ACAP1Q15027 740 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ZNF792Q3KQV3 632 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ANKRD22Q5VYY1 191 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 OLFML2BQ68BL8 750 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 WDR75Q8IWA0 830 aaKnown RBP12.94□□□□□ -0.34
CDX2-201ENST00000381020 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ARHGAP24Q8N264 748 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 TCP10LQ8TDR4 215 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 HERPUD2Q9BSE4 406 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 SYT11Q9BT88 431 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 LRRC4CQ9HCJ2 640 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 CDK5RAP2Q96SN8 1893 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.94□□□□□ -0.34
CDX2-201ENST00000381020 HSPA4LO95757 839 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 GSTA1P08263 222 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 GSTA2P09210 222 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 NPR3P17342 541 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
CDX2-201ENST00000381020 COG7P83436 770 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 EFTUD2Q15029 972 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDX2-201ENST00000381020 SLC25A41Q8N5S1 370 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 LRRC52Q8N7C0 313 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 PPFIBP2Q8ND30 876 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 HTR3CQ8WXA8 447 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 CCDC68Q9H2F9 335 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 SP110Q9HB58 689 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 KLC4Q9NSK0 619 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 LY75O60449 1722 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 DIAPH2O60879 1101 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 HAUS5O94927 633 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ADRA1DP25100 572 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 ETFBP38117 255 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 CD101Q93033 1021 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
CDX2-201ENST00000381020 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 RREB1Q92766 1687 aa12.94□□□□□ -0.34
CDX2-201ENST00000381020 PAPSS1O43252 624 aaPredicted RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 UBOX5O94941 541 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 FKBP1BP68106 108 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 MRPS6P82932 125 aaKnown RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 HIPK4Q8NE63 616 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 BHMTQ93088 406 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 FRMD8P1Q9BZ68 369 aaPredicted RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 MANSC1Q9H8J5 431 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 XAB2Q9HCS7 855 aaKnown RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 C20orf96Q9NUD7 363 aaPredicted RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 A0A1W2PPM1 405 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 GOLGA8TH3BQL2 631 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 RNF103O00237 685 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 GYG2O15488 501 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 POLBP06746 335 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 ELF1P32519 619 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 ABCG1P45844 678 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 NDUFV1P49821 464 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 ASPHQ12797 758 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 ARID3BQ8IVW6 561 aaPredicted RBP12.93□□□□□ -0.34
CDX2-201ENST00000381020 PYROXD2Q8N2H3 581 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 APBA2Q99767 749 aa12.93□□□□□ -0.34
CDX2-201ENST00000381020 MAF1Q9H063 256 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms