RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
CLCN4-201ENST00000380829 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 MIOSQ9NXC5 875 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 NINJ2Q9NZG7 142 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 ZMYND8Q9ULU4 1186 aaPredicted RBP14.84□□□□□ -0.03
CLCN4-201ENST00000380829 DPYSL4O14531 572 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 ATXN1P54253 815 aaKnown RBP14.84□□□□□ -0.03
CLCN4-201ENST00000380829 LAMB3Q13751 1172 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 KRT81Q14533 505 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
CLCN4-201ENST00000380829 TOP6BLQ8N6T0 577 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 RNF169Q8NCN4 708 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 PGM2Q96G03 612 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 TNIP3Q96KP6 325 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 RBM15Q96T37 977 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLCN4-201ENST00000380829 PCDH9Q9HC56 1237 aa14.84□□□□□ -0.03
CLCN4-201ENST00000380829 APOC4-APOC2K7ER74 178 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 AOC2O75106 756 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 LUC7L3O95232 432 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 APOC2P02655 101 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CD52P31358 61 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 MSH2P43246 934 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CLCNKBP51801 687 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 NRLP54845 237 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 HDAC4P56524 1084 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 EIF3EP60228 445 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 MGAT3Q09327 533 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CA9Q16790 459 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 C6orf118Q5T5N4 469 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ANO7Q6IWH7 933 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ZCCHC9Q8N567 271 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 SPATA18Q8TC71 538 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 NDRG1Q92597 394 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 RNF186Q9NXI6 227 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 TIMM13Q9Y5L4 95 aaPredicted RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ARL5CA6NH57 179 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 TMEM88BA6NKF7 163 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ENDOD1O94919 500 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 WARSP23381 471 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 SCNN1GP51170 649 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 SNX16P57768 344 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 MXRA7P84157 204 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 AUHQ13825 339 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 PDCD2Q16342 344 aaPredicted RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 ZDHHC17Q8IUH5 632 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 MFN1Q8IWA4 741 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 RSAD2Q8WXG1 361 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CENPTQ96BT3 561 aa14.83□□□□□ -0.04
CLCN4-201ENST00000380829 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 INTS9Q9NV88 658 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 NKX1-2Q9UD57 310 aaPredicted RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 G3BP2Q9UN86 482 aaKnown RBP14.83□□□□□ -0.04
CLCN4-201ENST00000380829 CASTOR2A6NHX0 329 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 GOLGA8MH3BSY2 632 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MGEA5O60502 916 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 BEST1O76090 585 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 THP07101 528 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 RBP3P10745 1247 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 RNASEH2BQ5TBB1 312 aaKnown RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 KIAA0319Q5VV43 1072 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 AGMOQ6ZNB7 445 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 PIGZQ86VD9 579 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 FAM71DQ8N9W8 422 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 DRAXINQ8NBI3 349 aaPredicted RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 C3orf58Q8NDZ4 430 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 PAAF1Q9BRP4 392 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 TMEM109Q9BVC6 243 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 SAYSD1Q9NPB0 183 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 CTNNAL1Q9UBT7 734 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MCF2LO15068 1137 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MAP3K6O95382 1288 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 PTPN1P18031 435 aaKnown RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 IL4RP24394 825 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MAGEA4P43358 317 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MMP13P45452 471 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 RABGGTBP53611 331 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 ROR2Q01974 943 aaKnown RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 ADIGQ0VDE8 80 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 FASTKD3Q14CZ7 662 aaKnown RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 BOLA3Q53S33 107 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 PPP6R3Q5H9R7 873 aaPredicted RBP14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 SLC26A9Q7LBE3 791 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 TEKT4Q8WW24 435 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 MAGEB5Q9BZ81 275 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 SLC38A7Q9NVC3 462 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 PADI3Q9ULW8 664 aa14.82□□□□□ -0.04
CLCN4-201ENST00000380829 GPR182O15218 404 aa14.81□□□□□ -0.04
CLCN4-201ENST00000380829 GAD2Q05329 585 aa14.81□□□□□ -0.04
CLCN4-201ENST00000380829 LRRC14Q15048 493 aa14.81□□□□□ -0.04
CLCN4-201ENST00000380829 FAM149B1Q96BN6 582 aa14.81□□□□□ -0.04
CLCN4-201ENST00000380829 RNF157Q96PX1 679 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms