RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 KIF2CQ99661 725 aa18.36■□□□□ 0.53
HMGN1-203ENST00000380748 NACA2Q9H009 215 aa18.36■□□□□ 0.53
HMGN1-203ENST00000380748 MARK1Q9P0L2 795 aa18.36■□□□□ 0.53
HMGN1-203ENST00000380748 RAI2Q9Y5P3 530 aa18.36■□□□□ 0.53
HMGN1-203ENST00000380748 ATMQ13315 3056 aa18.36■□□□□ 0.53
HMGN1-203ENST00000380748 TACC1O75410 805 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 ZDHHC11BP0C7U3 371 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 SLC5A3P53794 718 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 STARD3Q14849 445 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 DUOXA2Q1HG44 320 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 KIF19Q2TAC6 998 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 HTR3DQ70Z44 454 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 GPD1LQ8N335 351 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 B3GALNT2Q8NCR0 500 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 P2RY11Q96G91 374 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 WDR35Q9P2L0 1181 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 SNX11Q9Y5W9 270 aa18.35■□□□□ 0.53
HMGN1-203ENST00000380748 HECTD1Q9ULT8 2610 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 MYO18BQ8IUG5 2567 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 TLX3O43711 291 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-203ENST00000380748 HLA-EP13747 358 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
HMGN1-203ENST00000380748 SUZ12Q15022 739 aaKnown RBP18.34■□□□□ 0.53
HMGN1-203ENST00000380748 CACUL1Q86Y37 369 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 CBWD2Q8IUF1 395 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 DNAJC19Q96DA6 116 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 KLF16Q9BXK1 252 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-203ENST00000380748 PLK2Q9NYY3 685 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 IL37Q9NZH6 218 aa18.34■□□□□ 0.53
HMGN1-203ENST00000380748 A8MXQ7 604 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 E9PAM4 449 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 TLR5O60602 858 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.52
HMGN1-203ENST00000380748 TBX18O95935 607 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-203ENST00000380748 GAP43P17677 238 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 EIF2S3P41091 472 aaKnown RBP18.33■□□□□ 0.52
HMGN1-203ENST00000380748 IL12RB1P42701 662 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 CLDN6P56747 220 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 NUMA1Q14980 2115 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
HMGN1-203ENST00000380748 USP49Q70CQ1 688 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 FAM35AQ86V20 835 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 TMPRSS6Q8IU80 811 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 SNX19Q92543 992 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 NXPE2Q96DL1 559 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 SIPA1Q96FS4 1042 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 FCRL3Q96P31 734 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-203ENST00000380748 PCDHB13Q9Y5F0 798 aa18.33■□□□□ 0.52
HMGN1-203ENST00000380748 FAM92AA1XBS5 289 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 KCNK3O14649 394 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 IGLV3-19P01714 112 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 OXTRP30559 389 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 GRK6P43250 576 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 AFF3P51826 1226 aaKnown RBP18.32■□□□□ 0.52
HMGN1-203ENST00000380748 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 FAM124AQ86V42 546 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 EPSTI1Q96J88 318 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 NUP58Q9BVL2 599 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 OLFML3Q9NRN5 406 aa18.32■□□□□ 0.52
HMGN1-203ENST00000380748 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 COPAP53621 1224 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 TNNC1P63316 161 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 SEMG2Q02383 582 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 ENPP2Q13822 863 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 GEN1Q17RS7 908 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 WDR72Q3MJ13 1102 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 PAQR9Q6ZVX9 377 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 TMPRSS12Q86WS5 348 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 LSM14AQ8ND56 463 aaKnown RBP18.31■□□□□ 0.52
HMGN1-203ENST00000380748 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-203ENST00000380748 MED10Q9BTT4 135 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 DMAP1Q9NPF5 467 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-203ENST00000380748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.31■□□□□ 0.521e-9■■■■■ 62.2
HMGN1-203ENST00000380748 THAP10Q9P2Z0 257 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-203ENST00000380748 LSM7Q9UK45 103 aaKnown RBP18.31■□□□□ 0.52
HMGN1-203ENST00000380748 FBXO10Q9UK96 956 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 ANKRD6Q9Y2G4 727 aa18.31■□□□□ 0.52
HMGN1-203ENST00000380748 CKAP5Q14008 2032 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 ATP8B3O60423 1300 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 MYH10P35580 1976 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 H0Y8X5 98 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 SYNCRIPO60506 623 aaKnown RBP18.3■□□□□ 0.52
HMGN1-203ENST00000380748 FAM163BP0C2L3 166 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 IDEP14735 1019 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 CCT8P50990 548 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 IL9RQ01113 521 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 SF3A1Q15459 793 aaKnown RBP18.3■□□□□ 0.52
HMGN1-203ENST00000380748 SURF1Q15526 300 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 KCNT1Q5JUK3 1230 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 LRRC69Q6ZNQ3 347 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 C6orf106Q9H6K1 298 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-203ENST00000380748 NXF1Q9UBU9 619 aaKnown RBP18.3■□□□□ 0.52
HMGN1-203ENST00000380748 STK17AQ9UEE5 414 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 FTSJ1Q9UET6 329 aa18.3■□□□□ 0.52
HMGN1-203ENST00000380748 J3QKU1 62 aa18.29■□□□□ 0.52
HMGN1-203ENST00000380748 MDM4O15151 490 aa18.29■□□□□ 0.52
HMGN1-203ENST00000380748 PCDHGA12O60330 932 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms