RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SMIM5Q71RC9 77 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF571Q7Z3V5 609 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 FBXO11Q86XK2 927 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 ZDHHC14Q8IZN3 488 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 SLC15A4Q8N697 577 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CRYGNQ8WXF5 182 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TANKQ92844 425 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TMA16Q96EY4 203 aaKnown RBP7.75□□□□□ -1.17
CDKL5-201ENST00000379989 TSG101Q99816 390 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 C17orf80Q9BSJ5 609 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 HOXD1Q9GZZ0 328 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 C10orf88Q9H8K7 445 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 AMFRQ9UKV5 643 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
CDKL5-201ENST00000379989 CAPN14A8MX76 684 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 GOLGA8MH3BSY2 632 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 XPO1O14980 1071 aaKnown RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 KLHL41O60662 606 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ALX3O95076 343 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ATE1O95260 518 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ASNSP08243 561 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CHRNA3P32297 505 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ALDH1A3P47895 512 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CASP5P51878 434 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 NDST2P52849 883 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 PICALMQ13492 652 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 NFIL3Q16649 462 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 TBC1D10BQ4KMP7 808 aaPredicted RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 GLRX5Q86SX6 157 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 BRSK2Q8IWQ3 736 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 SYCE1Q8N0S2 351 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CLIP4Q8N3C7 705 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 GRIN3AQ8TCU5 1115 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ADAMTS16Q8TE57 1224 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 LRRC15Q8TF66 581 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 TMEM174Q8WUU8 243 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 GPKOWQ92917 476 aaPredicted RBP eCLIP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 HAUS8Q9BT25 410 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 TRIM9Q9C026 710 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ARMC1Q9NVT9 282 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 NAGPAQ9UK23 515 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 B3GNT3Q9Y2A9 372 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 A8MX80 341 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 H3BNX3 289 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 H7C0C1 242 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ZC3H11AO75152 810 aaKnown RBP eCLIP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 GABRB3P28472 473 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 NR4A2P43354 598 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 MOGQ16653 247 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 SMU1Q2TAY7 513 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 DNAL1Q4LDG9 190 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 SGO2Q562F6 1265 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 MDH1BQ5I0G3 518 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 AGAP7PQ5VUJ5 663 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CCDC137Q6PK04 289 aaKnown RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 EEPD1Q7L9B9 569 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 PLPP6Q8IY26 295 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ANGPTL6Q8NI99 470 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 PGBD4Q96DM1 585 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 VMP1Q96GC9 406 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF486Q96H40 463 aaPredicted RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 OXNAD1Q96HP4 312 aaPredicted RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 COQ7Q99807 217 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 FERMT1Q9BQL6 677 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 LSM14BQ9BX40 385 aaKnown RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 MRPL9Q9BYD2 267 aaKnown RBP7.74□□□□□ -1.17
CDKL5-201ENST00000379989 DCLK3Q9C098 648 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 NINJ2Q9NZG7 142 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ANKMY1Q9P2S6 941 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 ATP11BQ9Y2G3 1177 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 SPEF1Q9Y4P9 236 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 PPME1Q9Y570 386 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 CPQQ9Y646 472 aa7.74□□□□□ -1.17
CDKL5-201ENST00000379989 SYCE1LA8MT33 242 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KPNA4O00629 521 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 HOXC11O43248 304 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SORBS2O94875 1100 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ABCB4P21439 1286 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SLC18A1P54219 525 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 MARSP56192 900 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SNRPFP62306 86 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 KDSRQ06136 332 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 CALCOCO2Q13137 446 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ASIC2Q16515 512 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 LETM2Q2VYF4 491 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 RABGAP1LQ5R372 815 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 C6orf52Q5T4I8 152 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ALKBH5Q6P6C2 394 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TUBA3EQ6PEY2 450 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TAS2R42Q7RTR8 314 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 ALYREFQ86V81 257 aaKnown RBP7.73□□□□□ -1.17
CDKL5-201ENST00000379989 SPARTQ8N0X7 666 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 C4orf33Q8N1A6 199 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
CDKL5-201ENST00000379989 TRUB1Q8WWH5 349 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms