RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SAE1Q9UBE0 346 aaPredicted RBP10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 ST3GAL5Q9UNP4 418 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 NAALADL1Q9UQQ1 740 aa10.9□□□□□ -0.67
POLR2J3-201ENST00000379340 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 SEPT4O43236 478 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 GABBR2O75899 941 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 FBXO21O94952 628 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 ZBED1O96006 694 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 THP07101 528 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 RARBP10826 455 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 LCP1P13796 627 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 NPR3P17342 541 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 DRD4P21917 467 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 IL4RP24394 825 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 RPL9P32969 192 aaKnown RBP10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 MATKP42679 507 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 SLC18A1P54219 525 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 MGAT3Q09327 533 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 EFHC2Q5JST6 749 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 BZW1Q7L1Q6 419 aaKnown RBP10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 MRPL10Q7Z7H8 261 aaKnown RBP10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 OSTM1Q86WC4 334 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 CCDC13Q8IYE1 715 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 PQLC3Q8N755 202 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM71DQ8N9W8 422 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 PYROXD1Q8WU10 500 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 ZNF317Q96PQ6 595 aaPredicted RBP10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 GOLGA2P5Q9HBQ8 144 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 NKIRAS1Q9NYS0 192 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 RAPGEFL1Q9UHV5 662 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 STAP1Q9ULZ2 295 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 AP4E1Q9UPM8 1137 aa10.89□□□□□ -0.67
POLR2J3-201ENST00000379340 TMEM120BA0PK00 339 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 BRAFP15056 766 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 CYP2F1P24903 491 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 L1CAMP32004 1257 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 NOS2P35228 1153 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 MAGEA6P43360 314 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 AIF1P55008 147 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 BASP1P80723 227 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 KCNJ11Q14654 390 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 CCDC38Q502W7 563 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 ZC3H12AQ5D1E8 599 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 PIGZQ86VD9 579 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 FUKQ8N0W3 1084 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 PCDH19Q8TAB3 1148 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 DYDC1Q8WWB3 177 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 MAML1Q92585 1016 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 SGSM3Q96HU1 749 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 SEC16BQ96JE7 1060 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 B3GNT5Q9BYG0 378 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 NRDE2Q9H7Z3 1164 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 LRRC4Q9HBW1 653 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 SSU72Q9NP77 194 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 XPO7Q9UIA9 1087 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 OGDHLQ9ULD0 1010 aa10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-201ENST00000379340 HACD1B0YJ81 288 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 HCRTO43612 131 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ZNF623O75123 536 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SKIP12755 728 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ARL4AP40617 200 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SULT1E1P49888 294 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 GEMIN4P57678 1058 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 MRPS5P82675 430 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ITIH4Q14624 930 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 TMED2Q15363 201 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 LRRC26Q2I0M4 334 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 RAB6CQ53S08 254 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ANKRD22Q5VYY1 191 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 C1orf228Q6PIY5 440 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 C6orf89Q6UWU4 347 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 TRABD2AQ86V40 505 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ZC3H18Q86VM9 953 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 PALM2Q8IXS6 379 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SIX6OS1Q8N1H7 587 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 ANKS4BQ8N8V4 417 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CLEC4CQ8WTT0 213 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 TRIB2Q92519 343 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 CABS1Q96KC9 395 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SENP8Q96LD8 212 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 SLC2A13Q96QE2 648 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 PRMT1Q99873 361 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 LPIN3Q9BQK8 851 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 MED10Q9BTT4 135 aa10.87□□□□□ -0.67
POLR2J3-201ENST00000379340 KLC2Q9H0B6 622 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms