RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 EFEMP1Q12805 493 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 MTF1Q14872 753 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 PPP1R2P3Q6NXS1 205 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 MMS22LQ6ZRQ5 1243 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 TOGARAM2Q6ZUX3 1019 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 YAF2Q8IY57 180 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 EDAQ92838 391 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 FAM149B1Q96BN6 582 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 SLC2A13Q96QE2 648 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 FAM83CQ9BQN1 747 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 ABHD10Q9NUJ1 306 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 MARCH2Q9P0N8 246 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 CFAP97Q9P2B7 532 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 ARHGAP20Q9P2F6 1191 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 NAALADL1Q9UQQ1 740 aa19.6■□□□□ 0.73
SSU72-203ENST00000378725 E2F8A0AVK6 867 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 HSF2BPO75031 334 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 PLEKP08567 350 aaPredicted RBP19.59■□□□□ 0.73
SSU72-203ENST00000378725 GSCP56915 257 aaPredicted RBP19.59■□□□□ 0.73
SSU72-203ENST00000378725 C1QBPQ07021 282 aaKnown RBP19.59■□□□□ 0.73
SSU72-203ENST00000378725 C2CD6Q53TS8 623 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 SYPL2Q5VXT5 272 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 HTR3DQ70Z44 454 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 MON1BQ7L1V2 547 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 MIB1Q86YT6 1006 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 CNGA4Q8IV77 575 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 OSCP1Q8WVF1 389 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 IRF7Q92985 503 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 TAS2R14Q9NYV8 317 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 ADAM22Q9P0K1 906 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 WDR35Q9P2L0 1181 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 STRIP2Q9ULQ0 834 aa19.59■□□□□ 0.73
SSU72-203ENST00000378725 MYO16Q9Y6X6 1858 aa19.58■□□□□ 0.73
SSU72-203ENST00000378725 FAM170AA1A519 330 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 ADCY5O95622 1261 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 CALB1P05937 261 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 CDC25BP30305 580 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 PFKPQ01813 784 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 GOLGA8FQ08AF8 430 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 GOLGA8DPQ0D2H9 430 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 TSR1Q2NL82 804 aaKnown RBP19.58■□□□□ 0.72
SSU72-203ENST00000378725 TDRD12Q587J7 1177 aaKnown RBP19.58■□□□□ 0.72
SSU72-203ENST00000378725 CC2D1AQ6P1N0 951 aaPredicted RBP19.58■□□□□ 0.72
SSU72-203ENST00000378725 ARCQ7LC44 396 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 MCOLN2Q8IZK6 566 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 DEFB106AQ8N104 65 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 DNASE1L2Q92874 299 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 WBP2Q969T9 261 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 ASIC4Q96FT7 647 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 VCPIP1Q96JH7 1222 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 C11orf70Q9BRQ4 267 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 ZNHIT6Q9NWK9 470 aaKnown RBP19.58■□□□□ 0.72
SSU72-203ENST00000378725 WNT16Q9UBV4 365 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 ADAMTS1Q9UHI8 967 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 SFMBT1Q9UHJ3 866 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 TMEM59LQ9UK28 342 aa19.58■□□□□ 0.72
SSU72-203ENST00000378725 HBS1LQ9Y450 684 aaKnown RBP19.58■□□□□ 0.72
SSU72-203ENST00000378725 SLC12A8A0AV02 714 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 CAPN9O14815 690 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 STC2O76061 302 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 KPNA1P52294 538 aaPredicted RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 CDK17Q00537 523 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 EIF4EBP2Q13542 120 aaPredicted RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 PDGFRLQ15198 375 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 TRIP4Q15650 581 aaPredicted RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 VPS36Q86VN1 386 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 TC2NQ8N9U0 490 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 DQX1Q8TE96 717 aaKnown RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 ZFYVE19Q96K21 471 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 ISCUQ9H1K1 167 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 LINC00597Q9H2U6 94 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 DUS2Q9NX74 493 aaKnown RBP19.57■□□□□ 0.72
SSU72-203ENST00000378725 SH3BP1Q9Y3L3 701 aa19.57■□□□□ 0.72
SSU72-203ENST00000378725 SSU72P8A0A1W2PR75 194 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 TCRBV5S1A1TA0A578 114 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 SLC9A3R1O14745 358 aaPredicted RBP19.56■□□□□ 0.72
SSU72-203ENST00000378725 RTN2O75298 545 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 DAB1O75553 588 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 GRAP2O75791 330 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 IGLV3-25P01717 112 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 FTLP02792 175 aaPredicted RBP19.56■□□□□ 0.72
SSU72-203ENST00000378725 NOS2P35228 1153 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 MLLT6P55198 1093 aaPredicted RBP19.56■□□□□ 0.72
SSU72-203ENST00000378725 SIGLEC14Q08ET2 396 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 NNTQ13423 1086 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 ASTE1Q2TB18 679 aaPredicted RBP19.56■□□□□ 0.72
SSU72-203ENST00000378725 DCAF6Q58WW2 860 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 FAM102AQ5T9C2 384 aaPredicted RBP19.56■□□□□ 0.72
SSU72-203ENST00000378725 ADGRG2Q8IZP9 1017 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 OTUB2Q96DC9 234 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSU72-203ENST00000378725 TBC1D14Q9P2M4 693 aa19.56■□□□□ 0.72
SSU72-203ENST00000378725 VCANP13611 3396 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 MYO10Q9HD67 2058 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 A0A087X0T9 212 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 GOLGA8SH3BPF8 625 aa19.55■□□□□ 0.72
SSU72-203ENST00000378725 IGLV3-27P01718 113 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms