RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 GVINP1Q7Z2Y8 2422 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 F8W8V4 182 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 RPL7AP62424 266 aaKnown RBP8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 FNDC3BQ53EP0 1204 aaKnown RBP8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 COBLL1Q53SF7 1204 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 FAM183BPQ6ZVS7 135 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 CFAP52Q8N1V2 620 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 WNT8BQ93098 351 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 KREMEN1Q96MU8 473 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 TMEM121Q9BTD3 319 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 MLXIPLQ9NP71 852 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 PCDH10Q9P2E7 1040 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 SIK3Q9Y2K2 1263 aa8.77□□□□□ -1.01
CRNKL1-202ENST00000377340 MYH3P11055 1940 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ZMYM2Q9UBW7 1377 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 KRT37O76014 449 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SYF2O95926 243 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ATP13A4Q4VNC1 1196 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ERMARDQ5T6L9 678 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 C6orf163Q5TEZ5 329 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SERPINA13PQ6UXR4 307 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 VSIG1Q86XK7 387 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ZNF280BQ86YH2 543 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 IRF2BP1Q8IU81 584 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SUSD6Q92537 303 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 PCED1BQ96HM7 432 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 HSFY1Q96LI6 401 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SEZ6LQ9BYH1 1024 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SPEF2Q9C093 1822 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ZNF197O14709 1029 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NDUFS3O75489 264 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NOS2P35228 1153 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 TAF1BQ53T94 588 aaPredicted RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 MARC1Q5VT66 337 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NUGGCQ68CJ6 796 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CCNYL1Q8N7R7 359 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 GRIN3AQ8TCU5 1115 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ZSWIM1Q9BR11 485 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 ABCB6Q9NP58 842 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SAE1Q9UBE0 346 aaPredicted RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 DNAJB4Q9UDY4 337 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 GJD2Q9UKL4 321 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CHMP2BQ9UQN3 213 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 C4BPAP04003 597 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NRIP1P48552 1158 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CCDC15Q0P6D6 951 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 TFDP3Q5H9I0 405 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC13A5Q86YT5 568 aaPredicted RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 RMDN2Q96LZ7 410 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CDK5RAP1Q96SZ6 601 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 C10orf88Q9H8K7 445 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 RBM12Q9NTZ6 932 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 GMIPQ9P107 970 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 CFAP97Q9P2B7 532 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 XPO7Q9UIA9 1087 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NOVA2Q9UNW9 492 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 NAALADL1Q9UQQ1 740 aa8.76□□□□□ -1.01
CRNKL1-202ENST00000377340 LRRC10BA6NIK2 292 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 TYK2P29597 1187 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC11A1P49279 550 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 HABP4Q5JVS0 413 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 KIAA1324Q6UXG2 1013 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 SRRM1Q8IYB3 904 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ARL14EPQ8N8R7 260 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 POF1BQ8WVV4 589 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 TMEM40Q8WWA1 233 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 EXOC2Q96KP1 924 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 DUSP16Q9BY84 665 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.75□□□□□ -1.011e-5■■■■□ 19.8
CRNKL1-202ENST00000377340 NID2Q14112 1375 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MYH1P12882 1939 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 GOLGA8RI6L899 631 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 CHKAP35790 457 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 CREMQ03060 361 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 TMTC4Q5T4D3 741 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 KLC3Q6P597 504 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ADCK2Q7Z695 626 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MON1AQ86VX9 555 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 SNF8Q96H20 258 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 RBM15Q96T37 977 aaKnown RBP eCLIP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 RHOBTB2Q9BYZ6 727 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 CRLS1Q9UJA2 301 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 PKP3Q9Y446 797 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 A0A1W2PQH9 124 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ZNF263O14978 683 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 GMNNO75496 209 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 FGF18O76093 207 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 ATP5BP06576 529 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 POLR2EP19388 210 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 OAS2P29728 719 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 GTF2H3Q13889 308 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 MFSD7Q6UXD7 560 aa8.75□□□□□ -1.01
CRNKL1-202ENST00000377340 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms