RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TSPAN1O60635 241 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 HDAC4P56524 1084 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 OLFML1Q6UWY5 402 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 MICAL1Q8TDZ2 1067 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 FAM149B1Q96BN6 582 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 CYP3A43Q9HB55 503 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 NME7Q9Y5B8 376 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 PPP2R3BQ9Y5P8 575 aa16.86■□□□□ 0.29
TRIM27-202ENST00000377199 A6NJR5 290 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 KRT37O76014 449 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 PTPN4P29074 926 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 SLC10A2Q12908 348 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 CHI3L2Q15782 390 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 FAM131BQ86XD5 332 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 RNPEPL1Q9HAU8 725 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 POPDC2Q9HBU9 364 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 TRIP11Q15643 1979 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 CHADO15335 359 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 ATICP31939 592 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 GMPRP36959 345 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 ETV4P43268 484 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 SESN2P58004 480 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 ARHGAP1Q07960 439 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 TTC39BQ5VTQ0 682 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 UNC5AQ6ZN44 842 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 EIF2AQ9BY44 585 aaKnown RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
TRIM27-202ENST00000377199 NMUR2Q9GZQ4 415 aa16.85■□□□□ 0.29
TRIM27-202ENST00000377199 PDHA1P08559 390 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SNRPAP09012 282 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ESRRAP11474 423 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 AMPD1P23109 780 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 NEK3P51956 506 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SLC6A3Q01959 620 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 RASA2Q15283 850 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 CTC1Q2NKJ3 1217 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 PARP6Q2NL67 630 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 KHDC1Q4VXA5 237 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 BOLA3Q53S33 107 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 KCNT2Q6UVM3 1135 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ERO1BQ86YB8 467 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 DEPDC1BQ8WUY9 529 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 INPP5DQ92835 1189 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 LGMNQ99538 433 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 KCNK13Q9HB14 408 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 GOLGA2P5Q9HBQ8 144 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 H3BRB1 525 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 I3L4J1 428 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 GABBR2O75899 941 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ENO1P06733 434 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SLC26A2P50443 739 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 RABGGTBP53611 331 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 KDSRQ06136 332 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 BST1Q10588 318 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ACAP1Q15027 740 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 PRKD1Q15139 912 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 CCDC6Q16204 474 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 C16orf46Q6P387 395 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 RINLQ6ZS11 566 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 NRDE2Q9H7Z3 1164 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SSU72Q9NP77 194 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SETD4Q9NVD3 440 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 PPARGC1AQ9UBK2 798 aaKnown RBP16.84■□□□□ 0.29
TRIM27-202ENST00000377199 ITGA11Q9UKX5 1188 aa16.84■□□□□ 0.29
TRIM27-202ENST00000377199 SLC15A5A6NIM6 579 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 CES3Q6UWW8 571 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 BZW1Q7L1Q6 419 aaKnown RBP16.83■□□□□ 0.29
TRIM27-202ENST00000377199 PPP1R14CQ8TAE6 165 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 ATXN7L3BQ96GX2 97 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 RILPQ96NA2 401 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 TRIM6Q9C030 488 aaPredicted RBP16.83■□□□□ 0.29
TRIM27-202ENST00000377199 PLAC1Q9HBJ0 212 aa16.83■□□□□ 0.29
TRIM27-202ENST00000377199 FCHO1O14526 889 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 ENDOD1O94919 500 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 DLDP09622 509 aaKnown RBP16.83■□□□□ 0.28
TRIM27-202ENST00000377199 GOT1P17174 413 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 CALB2P22676 271 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 PAX7P23759 505 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 LMO2P25791 158 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 KPNB1Q14974 876 aaKnown RBP16.83■□□□□ 0.28
TRIM27-202ENST00000377199 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 STK32AQ8WU08 396 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRIM27-202ENST00000377199 SLC5A4Q9NY91 659 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 FETUBQ9UGM5 382 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 AP4E1Q9UPM8 1137 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 PPME1Q9Y570 386 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 ANK1P16157 1881 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 DNAJC25-GNG10A0A024R161 153 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 H3BRJ5 948 aa16.83■□□□□ 0.28
TRIM27-202ENST00000377199 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms