RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TSG101Q99816 390 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 EDEM2Q9BV94 578 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 WDR35Q9P2L0 1181 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 TRIM24O15164 1050 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 MAP3K13O43283 966 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 SMC2O95347 1197 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 RALAP11233 206 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 TYRP14679 529 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 P2RY2P41231 377 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 DHPSP49366 369 aaPredicted RBP22.14■■□□□ 1.13
VSX1-201ENST00000376707 DCAF17Q5H9S7 520 aaPredicted RBP22.14■■□□□ 1.13
VSX1-201ENST00000376707 RLN3Q8WXF3 142 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 TMEM176AQ96HP8 235 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 GTPBP4Q9BZE4 634 aaKnown RBP22.14■■□□□ 1.13
VSX1-201ENST00000376707 SPTBN2O15020 2390 aa22.14■■□□□ 1.13
VSX1-201ENST00000376707 CACNG3O60359 315 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 BYSLQ13895 437 aaKnown RBP22.13■■□□□ 1.13
VSX1-201ENST00000376707 LPCAT2Q7L5N7 544 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 SCD5Q86SK9 330 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 MIB1Q86YT6 1006 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 ZC3H3Q8IXZ2 948 aaKnown RBP22.13■■□□□ 1.13
VSX1-201ENST00000376707 ELOA2Q8IYF1 753 aaPredicted RBP22.13■■□□□ 1.13
VSX1-201ENST00000376707 CNTNAP3BQ96NU0 1288 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 CDK5RAP1Q96SZ6 601 aaKnown RBP22.13■■□□□ 1.13
VSX1-201ENST00000376707 ARID3AQ99856 593 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 CNTNAP3Q9BZ76 1288 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 CLIC5Q9NZA1 410 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 MARK1Q9P0L2 795 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 HOOK1Q9UJC3 728 aaKnown RBP22.13■■□□□ 1.13
VSX1-201ENST00000376707 USP3Q9Y6I4 520 aa22.13■■□□□ 1.13
VSX1-201ENST00000376707 TM4SF5O14894 197 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 KHNYNO15037 678 aaKnown RBP22.12■■□□□ 1.13
VSX1-201ENST00000376707 SLC16A3O15427 465 aaKnown RBP22.12■■□□□ 1.13
VSX1-201ENST00000376707 RAD23BP54727 409 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 SLC8A3P57103 927 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 ZNF276Q8N554 614 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 SLC4A11Q8NBS3 891 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 TATDN2Q93075 761 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 SMARCE1Q969G3 411 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 FAM124BQ9H5Z6 455 aaPredicted RBP22.12■■□□□ 1.13
VSX1-201ENST00000376707 STARD13Q9Y3M8 1113 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 MYH10P35580 1976 aa22.12■■□□□ 1.13
VSX1-201ENST00000376707 MYOFQ9NZM1 2061 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 HOXB2P14652 356 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 NTSR1P30989 418 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 WASP42768 502 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 FKBP3Q00688 224 aaKnown RBP22.11■■□□□ 1.13
VSX1-201ENST00000376707 CBWD6Q4V339 395 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 CBWD3Q5JTY5 395 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 CBWD5Q5RIA9 395 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 ARHGAP17Q68EM7 881 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 SDE2Q6IQ49 451 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 Q6ZNB5 142 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 PIGKQ92643 395 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 BHMTQ93088 406 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 RASAL2Q9UJF2 1139 aa22.11■■□□□ 1.13
VSX1-201ENST00000376707 LNP1A1A4G5 178 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 ZBTB24O43167 697 aaPredicted RBP22.1■■□□□ 1.13
VSX1-201ENST00000376707 STC2O76061 302 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 DGKGP49619 791 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 COG7P83436 770 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 LRRC63Q05C16 580 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 EFEMP1Q12805 493 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 EGFLAMQ63HQ2 1017 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 ANKRD40Q6AI12 368 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 PIGZQ86VD9 579 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 CHPFQ8IZ52 775 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 ARHGAP18Q8N392 663 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 FRMD1Q8N878 549 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 ANKRD52Q8NB46 1076 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
VSX1-201ENST00000376707 UBXN6Q9BZV1 441 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 ZNF510Q9Y2H8 683 aa22.1■■□□□ 1.13
VSX1-201ENST00000376707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 PMS1P54277 932 aaKnown RBP22.09■■□□□ 1.13
VSX1-201ENST00000376707 MAP7D1Q3KQU3 841 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 TOGARAM2Q6ZUX3 1019 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 RSRC2Q7L4I2 434 aaKnown RBP22.09■■□□□ 1.13
VSX1-201ENST00000376707 ARMCX6Q7L4S7 300 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 TMEFF1Q8IYR6 380 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 ERCC4Q92889 916 aaPredicted RBP22.09■■□□□ 1.13
VSX1-201ENST00000376707 DCLK3Q9C098 648 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 PLK2Q9NYY3 685 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 ARMCX3Q9UH62 379 aaPredicted RBP22.09■■□□□ 1.13
VSX1-201ENST00000376707 MBD1Q9UIS9 605 aaPredicted RBP22.09■■□□□ 1.13
VSX1-201ENST00000376707 HCN2Q9UL51 889 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 COQ4Q9Y3A0 265 aa22.09■■□□□ 1.13
VSX1-201ENST00000376707 C4orf47A7E2U8 309 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 PATE3B3GLJ2 98 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 PRRT4C9JH25 899 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 HMBSP08397 361 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 GABRG2P18507 467 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 YWHAEP62258 255 aaKnown RBP22.08■■□□□ 1.13
VSX1-201ENST00000376707 CUL2Q13617 745 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 GOLGA7BQ2TAP0 167 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 RAB41Q5JT25 222 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 DAB2IPQ5VWQ8 1189 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 ACOX2Q99424 681 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 STRIP2Q9ULQ0 834 aa22.08■■□□□ 1.13
VSX1-201ENST00000376707 A0A1W2PQF6 199 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms