RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PATJQ8NI35 1801 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 APOL1O14791 398 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 ALDH2P05091 517 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 SLC39A12Q504Y0 691 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 VARS2Q5ST30 1063 aaKnown RBP18.4■□□□□ 0.54
CTTN-203ENST00000376561 IZUMO3Q5VZ72 239 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 PLD5Q8N7P1 536 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 DIS3LQ8TF46 1054 aaKnown RBP18.4■□□□□ 0.54
CTTN-203ENST00000376561 IRGQQ8WZA9 623 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 ZNF333Q96JL9 665 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 PABPC3Q9H361 631 aaKnown RBP18.4■□□□□ 0.54
CTTN-203ENST00000376561 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 PCDH9Q9HC56 1237 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 FZD10Q9ULW2 581 aa18.4■□□□□ 0.54
CTTN-203ENST00000376561 SYNJ2BP-COX16A0A087WUM0 186 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 IFNB1P01574 187 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 RBP3P10745 1247 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 NCAM1P13591 858 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 TGM2P21980 687 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 GDF10P55107 478 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 DEUP1Q05D60 604 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 SCML4Q8N228 414 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 KCTD15Q96SI1 283 aaPredicted RBP18.39■□□□□ 0.54
CTTN-203ENST00000376561 COLEC11Q9BWP8 271 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 MRPL9Q9BYD2 267 aaKnown RBP18.39■□□□□ 0.54
CTTN-203ENST00000376561 EPB41L4BQ9H329 900 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 AAASQ9NRG9 546 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 COX16Q9P0S2 106 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 USP3Q9Y6I4 520 aa18.39■□□□□ 0.54
CTTN-203ENST00000376561 FNDC1Q4ZHG4 1894 aaPredicted RBP18.39■□□□□ 0.53
CTTN-203ENST00000376561 MICAL3Q7RTP6 2002 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 RARGP13631 454 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 CYP2F1P24903 491 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 SLC11A1P49279 550 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 GPS1Q13098 491 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 NME3Q13232 169 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 FAM171A1Q5VUB5 890 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 C1orf228Q6PIY5 440 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 PSTKQ8IV42 348 aaKnown RBP18.39■□□□□ 0.53
CTTN-203ENST00000376561 DCP1BQ8IZD4 617 aaKnown RBP18.39■□□□□ 0.53
CTTN-203ENST00000376561 OR2W6PQ8NHA6 318 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 SLC7A14Q8TBB6 771 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 RSAD2Q8WXG1 361 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 GPR62Q9BZJ7 368 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 ADAM7Q9H2U9 754 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 PIGVQ9NUD9 493 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 MARCH5Q9NX47 278 aa18.39■□□□□ 0.53
CTTN-203ENST00000376561 TBKBP1A7MCY6 615 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 GOLGA8KD6RF30 607 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 DNALI1O14645 258 aaPredicted RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 CHKAP35790 457 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 GRIK1P39086 918 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 GYS2P54840 703 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 HIBCHQ6NVY1 386 aaPredicted RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 CCDC25Q86WR0 208 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 CEP57Q86XR8 500 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 UNC45BQ8IWX7 931 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 PYROXD2Q8N2H3 581 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 TSPYL1Q9H0U9 437 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 SEMA4AQ9H3S1 761 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 CEP85LQ5SZL2 805 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 ZC3H18Q86VM9 953 aaKnown RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 SCAMP5Q8TAC9 235 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 ADAM32Q8TC27 787 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 ARL8AQ96BM9 186 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 PGAP3Q96FM1 320 aaPredicted RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 CSPG4P5Q96PW8 444 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 ABI2Q9NYB9 513 aaPredicted RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 RRN3Q9NYV6 651 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 CWC15Q9P013 229 aaKnown RBP18.38■□□□□ 0.53
CTTN-203ENST00000376561 ATP11BQ9Y2G3 1177 aa18.38■□□□□ 0.53
CTTN-203ENST00000376561 COL4A4P53420 1690 aaPredicted RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 ZNF844Q08AG5 666 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 MRPL58Q14197 206 aaKnown RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 NFE2Q16621 373 aaPredicted RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 BSPRYQ5W0U4 402 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 EDEM1Q92611 657 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 SLC9A7Q96T83 725 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 TMEM175Q9BSA9 504 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 TMPRSS4Q9NRS4 437 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 HEY1Q9Y5J3 304 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 SF3B1O75533 1304 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■■■■ 114.1
CTTN-203ENST00000376561 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 GALTP07902 379 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 SLC5A3P53794 718 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 ROR1Q01973 937 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 GABPB1Q06547 395 aaPredicted RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 CTXN3Q4LDR2 81 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 TTMPQ5BVD1 217 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 DARS2Q6PI48 645 aaKnown RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 FUBP3Q96I24 572 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTTN-203ENST00000376561 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
CTTN-203ENST00000376561 RCOR3Q9P2K3 495 aaPredicted RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 TPX2Q9ULW0 747 aaKnown RBP18.37■□□□□ 0.53
CTTN-203ENST00000376561 NT5C1B-RDH14C9J2C7 533 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms