RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KYAT3Q6YP21 454 aaKnown RBP13.41□□□□□ -0.26
MSH5-204ENST00000375755 TAB3Q8N5C8 712 aaPredicted RBP13.41□□□□□ -0.26
MSH5-204ENST00000375755 OR5B17Q8NGF7 314 aa13.41□□□□□ -0.26
MSH5-204ENST00000375755 APOPT1Q96IL0 206 aa13.41□□□□□ -0.26
MSH5-204ENST00000375755 MSTO1Q9BUK6 570 aa13.41□□□□□ -0.26
MSH5-204ENST00000375755 PRR5-ARHGAP8B1AHC4 643 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ADCY6O43306 1168 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 EXTL3O43909 919 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CCDC166P0CW27 439 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 GARTP22102 1010 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 OSTNP61366 133 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 SNRPFP62306 86 aaKnown RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 ARHGAP8P85298 464 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 NCOA4Q13772 614 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 OASLQ15646 514 aaKnown RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 SH2D4BQ5SQS7 431 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CES4AQ5XG92 561 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 DRICH1Q6PGQ1 229 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 FBXO36Q8NEA4 188 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 C11orf70Q9BRQ4 267 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 MECRQ9BV79 373 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 KLHL4Q9C0H6 718 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CIDEBQ9UHD4 219 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 TXNDC9O14530 226 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 VNN1O95497 513 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CFHP08603 1231 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CPOXP36551 454 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 GPC3P51654 580 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CHN2P52757 468 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 ITGA9Q13797 1035 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ZNF792Q3KQV3 632 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ZFYVE27Q5T4F4 411 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 SH2D5Q6ZV89 423 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 MON1BQ7L1V2 547 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 ARID3BQ8IVW6 561 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 PRICKLE1Q96MT3 831 aaPredicted RBP13.4□□□□□ -0.26
MSH5-204ENST00000375755 SLITRK1Q96PX8 696 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 CCDC106Q9BWC9 280 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 C10orf88Q9H8K7 445 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
MSH5-204ENST00000375755 SGK1O00141 431 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 ADCY3O60266 1144 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 VCPP55072 806 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 TBL3Q12788 808 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 UBAP2LQ14157 1087 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 MAF1Q9H063 256 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 GBA2Q9HCG7 927 aaPredicted RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 NDUFA13Q9P0J0 144 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 MARCOQ9UEW3 520 aaPredicted RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 MSCO60682 206 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 SORBS2O94875 1100 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 KITP10721 976 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 SLC25A3Q00325 362 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 PTK7Q13308 1070 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 PRAMEF19Q5SWL8 479 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 CST9Q5W186 159 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 B3GNT6Q6ZMB0 384 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 SMYD3Q9H7B4 428 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 PCDH9Q9HC56 1237 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 ZNF232Q9UNY5 417 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
MSH5-204ENST00000375755 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
MSH5-204ENST00000375755 C15orf38-AP3S2A0A0A6YYH1 394 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
MSH5-204ENST00000375755 KRT1P04264 644 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 TFAP2AP05549 437 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 PLCB3Q01970 1234 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 BST1Q10588 318 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 CCNIQ14094 377 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 DBN1Q16643 649 aa13.38□□□□□ -0.27
MSH5-204ENST00000375755 BBS9Q3SYG4 887 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms