RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 LNX1Q8TBB1 728 aaPredicted RBP21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 SYTL5Q8TDW5 730 aaPredicted RBP21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 GPATCH2LQ9NWQ4 482 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 SPANXN3Q5MJ09 141 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 OSCP1Q8WVF1 389 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 SYTL2Q9HCH5 934 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 HACD1B0YJ81 288 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 DDHD2O94830 711 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 FASP25445 335 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 LPCAT2Q7L5N7 544 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 JCADQ9P266 1359 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 RAG1P15918 1043 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 FAAP100Q0VG06 881 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 BMT2Q1RMZ1 405 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 C1orf186Q6ZWK4 172 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 CYP3A7-CYP3A51PA0A087WV96 503 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 ATP4AP20648 1035 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 CYP3A7P24462 503 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 TAF2Q6P1X5 1199 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 COLGALT1Q8NBJ5 622 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 VWA5AO00534 786 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 NPTXRO95502 500 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 MMP14P50281 582 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 MMRN1Q13201 1228 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 NFYCQ13952 458 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 TMEM39BQ9GZU3 492 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 COPG2Q9UBF2 871 aa21.8■■□□□ 1.08
TGFBR1-202ENST00000374994 ITGA9Q13797 1035 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 TRIM60Q495X7 471 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 TMEM79Q9BSE2 394 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 POLLQ9UGP5 575 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 CORO1CQ9ULV4 474 aaPredicted RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 PMPCBO75439 489 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 LCA5LO95447 670 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 RAD23AP54725 363 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 ERO1BQ86YB8 467 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 C2orf69Q8N8R5 385 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 FOPNLQ96NB1 174 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 LRMDAQ9H2I8 198 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 GGA3Q9NZ52 723 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 TRMT6Q9UJA5 497 aaKnown RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 FSCN2O14926 492 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 CYP2C9P11712 490 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 BST2Q10589 180 aaKnown RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 CCDC33Q8N5R6 958 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 PXMP2Q9NR77 195 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 NPY2RP49146 381 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 ACOT1Q86TX2 421 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 RASGEF1CQ8N431 466 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 PRCCQ92733 491 aaPredicted RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 THUMPD3Q9BV44 507 aaKnown RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 CTNNAL1Q9UBT7 734 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 VANGL2Q9ULK5 521 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 SEZ6Q53EL9 994 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 LACTB2Q53H82 288 aaPredicted RBP21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 FAM71AQ8IYT1 594 aa21.79■■□□□ 1.08
TGFBR1-202ENST00000374994 VPS26AO75436 327 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 TBC1D10AQ9BXI6 508 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 ITGA11Q9UKX5 1188 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 MYRFQ9Y2G1 1151 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 SMIM5Q71RC9 77 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 BRSK2Q8IWQ3 736 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 BTBD7Q9P203 1132 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 ADGRA2Q96PE1 1338 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CHADO15335 359 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 STAG3L1P0CL83 205 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CHRM3P20309 590 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CDH17Q12864 832 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 THEMIS2Q5TEJ8 643 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 VPS33AQ96AX1 596 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 PRKD2Q9BZL6 878 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CHST12Q9NRB3 414 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CROTQ9UKG9 612 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 CFAP99D6REC4 459 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 DPYSL3Q14195 570 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 OR6Y1Q8NGX8 325 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 RMND5AQ9H871 391 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 MAPK1P28482 360 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 RPA3P35244 121 aaPredicted RBP21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 TTLL9Q3SXZ7 439 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 IL31Q6EBC2 164 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 NEUROG2Q9H2A3 272 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 RRN3Q9NYV6 651 aa21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 TSR3Q9UJK0 312 aaKnown RBP21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 BARX2Q9UMQ3 279 aaPredicted RBP21.78■■□□□ 1.08
TGFBR1-202ENST00000374994 MROH2AA6NES4 1674 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 SPATA31A5Q5VU36 1347 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 SPATA31A7Q8IWB4 1347 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 ATP6V1C1P21283 382 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 PPIDQ08752 370 aaKnown RBP21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 ATP6V0D2Q8N8Y2 350 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 STN1Q9H668 368 aaKnown RBP21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 ROBO3Q96MS0 1386 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 CACNB2Q08289 660 aaPredicted RBP21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 HTR3CQ8WXA8 447 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 SH3KBP1Q96B97 665 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 EXOSC4Q9NPD3 245 aaKnown RBP21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 SYBUQ9NX95 663 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 CRABP2P29373 138 aa21.77■■□□□ 1.08
TGFBR1-202ENST00000374994 CHRNA5P30532 468 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms