RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 POLLQ9UGP5 575 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 SAP30BPQ9UHR5 308 aaKnown RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 ZNF215Q9UL58 517 aaPredicted RBP5.28□□□□□ -1.56
USP48-202ENST00000374730 STX8Q9UNK0 236 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 PPP2R2CQ9Y2T4 447 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ATP6V0A2Q9Y487 856 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 CHST2Q9Y4C5 530 aa5.28□□□□□ -1.56
USP48-202ENST00000374730 ATAD5Q96QE3 1844 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 TEX33O43247 280 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 KLRC4O43908 158 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 RPN1P04843 607 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 PDHBP11177 359 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 MTHFD2P13995 350 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 EEF1GP26641 437 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 CASP1P29466 404 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 UBA7P41226 1012 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 FLT3LGP49771 235 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 COPB1P53618 953 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 NAPAP54920 295 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 FAPQ12884 760 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 NONOQ15233 471 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP48-202ENST00000374730 SLC4A8Q2Y0W8 1093 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 COBLL1Q53SF7 1204 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 RRAGBQ5VZM2 374 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 KLHL10Q6JEL2 608 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 BTNL9Q6UXG8 535 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 SYT10Q6XYQ8 523 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 NEK8Q86SG6 692 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 PLXDC1Q8IUK5 500 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 CNGA4Q8IV77 575 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 ADSSL1Q8N142 457 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 PRPF38AQ8NAV1 312 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 ANKRD20A12PQ8NF67 263 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 OR10H5Q8NGA6 315 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 NOC3LQ8WTT2 800 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 LMBR1Q8WVP7 490 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 NELFBQ8WX92 580 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 RRP36Q96EU6 259 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 CEP95Q96GE4 821 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 TMEM60Q9H2L4 133 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 ZNF768Q9H5H4 540 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 SEC63Q9UGP8 760 aaKnown RBP5.27□□□□□ -1.57
USP48-202ENST00000374730 SWAP70Q9UH65 585 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 DPP7Q9UHL4 492 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.27□□□□□ -1.575e-19■□□□□ 8.7
USP48-202ENST00000374730 SLX4Q8IY92 1834 aa5.27□□□□□ -1.57
USP48-202ENST00000374730 COL2A1P02458 1487 aaPredicted RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 KIF13BQ9NQT8 1826 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 SMCO2A6NFE2 343 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TBKBP1A7MCY6 615 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 RNASET2O00584 256 aaKnown RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 PJA2O43164 708 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TPM1P09493 284 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 CCDC175P0C221 793 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 GOLGA8HP0CJ92 632 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 RBP3P10745 1247 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 NPR1P16066 1061 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 CPEP16870 476 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 ZSCAN20P17040 1043 aaPredicted RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 ADKP55263 362 aaKnown RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 STX17P56962 302 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 FKBP1AP62942 108 aaKnown RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 GOLGA8FQ08AF8 430 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 GOLGA8DPQ0D2H9 430 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 STIM1Q13586 685 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 KRT31Q15323 416 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 CSRP2Q16527 193 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 BMT2Q1RMZ1 405 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 ANO4Q32M45 955 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 HSP90AA4PQ58FG1 418 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TCP11X2Q5H9J9 407 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 PRAMEF14Q5SWL7 426 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 EFCAB12Q6NXP0 572 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TOGARAM2Q6ZUX3 1019 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 SMAP1Q8IYB5 467 aaPredicted RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 UBR7Q8N806 425 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 OR7D4Q8NG98 312 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 MDM1Q8TC05 714 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TSPEARQ8WU66 669 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 STAMQ92783 540 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 CCDC47Q96A33 483 aaKnown RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 DHTKD1Q96HY7 919 aaPredicted RBP5.26□□□□□ -1.57
USP48-202ENST00000374730 C8orf48Q96LL4 319 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 PIGSQ96S52 555 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 C7orf25Q9BPX7 421 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 BLZF1Q9H2G9 400 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 THAP9Q9H5L6 903 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 BCO1Q9HAY6 547 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 SPON1Q9HCB6 807 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 MTMR4Q9NYA4 1195 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 TRPM5Q9NZQ8 1165 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 LOXHD1Q8IVV2 1947 aa5.26□□□□□ -1.57
USP48-202ENST00000374730 BICDL2A1A5D9 508 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GRID2IPA4D2P6 1211 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TMEM200CA6NKL6 621 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 PP2D1A8MPX8 630 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms