RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 STAP1Q9ULZ2 295 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 ALG6Q9Y672 507 aa15.29■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF840PA6NDX5 716 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 GLP2RO95838 553 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 F11P03951 625 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 CHRM1P11229 460 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 EPHA5P54756 1037 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 ADGRE1Q14246 886 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 TMEM150AQ86TG1 271 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 ZNF707Q96C28 371 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 ADAM33Q9BZ11 813 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 GOLPH3Q9H4A6 298 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 IGFLR1Q9H665 355 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 SFXN1Q9H9B4 322 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 ASAH2Q9NR71 780 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 TRPM5Q9NZQ8 1165 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
SMPDL3B-201ENST00000373888 TMEM110-MUSTN1A8MSY1 372 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 ENDOD1O94919 500 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 RALAP11233 206 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 RARGP13631 454 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 DESP17661 470 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 PTPN2P17706 415 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 COMTP21964 271 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 SULT1E1P49888 294 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 TUBP50607 506 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 C15orf59Q2T9L4 293 aaPredicted RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 PABPC1LQ4VXU2 614 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 MSANTD2Q6P1R3 559 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 NT5DC3Q86UY8 548 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 ARFGAP1Q8N6T3 406 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 LEMD2Q8NC56 503 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 DQX1Q8TE96 717 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 FAM172AQ8WUF8 416 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 PGAP3Q96FM1 320 aaPredicted RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 NCAPGQ9BPX3 1015 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 SMOC2Q9H3U7 446 aa15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 OLA1Q9NTK5 396 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 DNMT3BQ9UBC3 853 aaKnown RBP15.27■□□□□ 0.04
SMPDL3B-201ENST00000373888 MYO9BQ13459 2157 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 CCDC195A0A1B0GUA6 201 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 LRCH4O75427 683 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 RNF8O76064 485 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 FGF19O95750 216 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 FTCDO95954 541 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 IGLV3-25P01717 112 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 PRLRP16471 622 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 TFE3P19532 575 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 CDC25CP30307 473 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 PCK1P35558 622 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 PITX1P78337 314 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 ATP11AP98196 1134 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 AMPD2Q01433 879 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 CKAP4Q07065 602 aaKnown RBP15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 GAREM2Q75VX8 874 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 PEX26Q7Z412 305 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 HS6ST3Q8IZP7 471 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 CD101Q93033 1021 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 TBCBQ99426 244 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 HCFC1R1Q9NWW0 138 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 AMFRQ9UKV5 643 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 SAR1BQ9Y6B6 198 aa15.27■□□□□ 0.03
SMPDL3B-201ENST00000373888 M0QYT0 321 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 LINC01565O15544 149 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 SPOPO43791 374 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 TLR5O60602 858 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 GABRR2P28476 465 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 HDAC4P56524 1084 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 ADAM15Q13444 863 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 EIF4EBP2Q13542 120 aaPredicted RBP15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 CDO1Q16878 200 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 HECTD3Q5T447 861 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 DAB2IPQ5VWQ8 1189 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 KLHDC10Q6PID8 442 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 RSRC2Q7L4I2 434 aaKnown RBP15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 TADA2BQ86TJ2 420 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 TAC4Q86UU9 113 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 RNF139Q8WU17 664 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 USTQ9Y2C2 406 aa15.26■□□□□ 0.03
SMPDL3B-201ENST00000373888 NCK2O43639 380 aa15.25■□□□□ 0.03
SMPDL3B-201ENST00000373888 F9P00740 461 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms