RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 EPB41L4BQ9H329 900 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 KLC4Q9NSK0 619 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 ETNK2Q9NVF9 386 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 SLC17A7Q9P2U7 560 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 ZNF831Q5JPB2 1677 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 APOC4-APOC2K7ER74 178 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 DNM1LO00429 736 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 UGT1A9O60656 530 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 LGR5O75473 907 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 KRT37O76014 449 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 CD4P01730 458 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 APOC2P02655 101 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 THP07101 528 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 BGNP21810 368 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 BCAT1P54687 386 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 METTL23Q86XA0 190 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 PRCCQ92733 491 aaPredicted RBP13.68□□□□□ -0.22
NCDN-203ENST00000373253 RNF157Q96PX1 679 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
NCDN-203ENST00000373253 UGT1A7Q9HAW7 530 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 UGT1A10Q9HAW8 530 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 UGT1A8Q9HAW9 530 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
NCDN-203ENST00000373253 GMPRP36959 345 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 MMP13P45452 471 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 BST2Q10589 180 aaKnown RBP13.68□□□□□ -0.22
NCDN-203ENST00000373253 SLC1A5Q15758 541 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 ANKRD20A8PQ5CZ79 823 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 KAT2BQ92831 832 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 EXT2Q93063 718 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 CPSF2Q9P2I0 782 aaKnown RBP13.68□□□□□ -0.22
NCDN-203ENST00000373253 COMMD10Q9Y6G5 202 aa13.68□□□□□ -0.22
NCDN-203ENST00000373253 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 WDR27A2RRH5 827 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 MYBPHLA2RUH7 354 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SPTLC1O15269 473 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 BNIP3LO60238 219 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 PMPCBO75439 489 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 CBX6O95503 412 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 TOP3BO95985 862 aaKnown RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 ATICP31939 592 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 CLCNKBP51801 687 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SOX4Q06945 474 aaPredicted RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SNCBQ16143 134 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 CDCA2Q69YH5 1023 aaPredicted RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 NXNQ6DKJ4 435 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 MCUQ8NE86 351 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SGF29Q96ES7 293 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ARHGAP39Q9C0H5 1083 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 NRCAMQ92823 1304 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 PMM2O15305 246 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 JCHAINP01591 159 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 CYP3A5P20815 502 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 YWHAZP63104 245 aaKnown RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 KDSRQ06136 332 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ZNF792Q3KQV3 632 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SV2CQ496J9 727 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 TFAP2DQ7Z6R9 452 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 TP53INP2Q8IXH6 220 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 TSNARE1Q96NA8 513 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 PLEKHA5Q9HAU0 1116 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ZFATQ9P243 1243 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 L3MBTL1Q9Y468 752 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 FGFR1P11362 822 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 TYK2P29597 1187 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 FLT3LGP49771 235 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 GEN1Q17RS7 908 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 KLHL38Q2WGJ6 581 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SYPL2Q5VXT5 272 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 NUDCD3Q8IVD9 361 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 PLD5Q8N7P1 536 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ZNF669Q96BR6 464 aaPredicted RBP13.67□□□□□ -0.22
NCDN-203ENST00000373253 ADAM2Q99965 735 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 SYT15Q9BQS2 421 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 ARMCX1Q9P291 453 aa13.67□□□□□ -0.22
NCDN-203ENST00000373253 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 ETFBP38117 255 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 NAA25Q14CX7 972 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 CYP1B1Q16678 543 aa13.66□□□□□ -0.22
NCDN-203ENST00000373253 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
NCDN-203ENST00000373253 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms