RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 CCT8L2Q96SF2 557 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 RRAGCQ9HB90 399 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 IARS2Q9NSE4 1012 aaKnown RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 RRN3Q9NYV6 651 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 H3BRB1 525 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 STRNO43815 780 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 GUCY1B2O75343 617 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 FBXO47Q5MNV8 452 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 CLEC17AQ6ZS10 378 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 CSGALNACT1Q8TDX6 532 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 ERP27Q96DN0 273 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 CELF4Q9BZC1 486 aaKnown RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 TUT1Q9H6E5 874 aaKnown RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 UXTQ9UBK9 157 aaPredicted RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 CXCL11O14625 94 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 MED24O75448 989 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 RBP1P09455 135 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 WEE1P30291 646 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 ILF2Q12905 390 aaKnown RBP10.18□□□□□ -0.78
TRERF1-204ENST00000372922 GRB10Q13322 594 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 GRIK4Q16099 956 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 FICDQ9BVA6 458 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 AHSPQ9NZD4 102 aa10.18□□□□□ -0.78
TRERF1-204ENST00000372922 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 NFIBO00712 420 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 ENDOD1O94919 500 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CYP11B1P15538 503 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CCR1P32246 355 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 RAP1GAPP47736 663 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 COPAP53621 1224 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FUT11Q495W5 492 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 ZNF544Q6NX49 715 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 UTS2BQ765I0 119 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CBWD2Q8IUF1 395 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 NT5MQ9NPB1 228 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 DDX43Q9NXZ2 648 aaKnown RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PADI4Q9UM07 663 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PQBP1O60828 265 aaKnown RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PTPN3P26045 913 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 TKTL1P51854 596 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 INTS5Q6P9B9 1019 aaKnown RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 TRPM8Q7Z2W7 1104 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 LRRC6Q86X45 466 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 VMP1Q96GC9 406 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 TMEM51Q9NW97 253 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CYP39A1Q9NYL5 469 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 GNG14A0A1W2PPG7 69 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 M0R3G1 203 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 USP1O94782 785 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 RTN3O95197 1032 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 GYPCP04921 128 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 AXLP30530 894 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 HSPA13P48723 471 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FAXCQ5TGI0 409 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 OVOS1Q6IE37 1185 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FAM83AQ86UY5 434 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 SEC16BQ96JE7 1060 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 OSMRQ99650 979 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FDXACB1Q9BRP7 624 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 ARHGEF3Q9NR81 526 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 V9GYQ6 96 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 RNF103O00237 685 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 GYS1P13807 737 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CYP24A1Q07973 514 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PPIL2Q13356 520 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 BTG3Q14201 252 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 WDR60Q8WVS4 1066 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 MAGEB10Q96LZ2 347 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 SENP2Q9HC62 589 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 DMAP1Q9NPF5 467 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 SOX13Q9UN79 622 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 ZDHHC9Q9Y397 364 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PHF20L1A8MW92 1017 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 FOXN3O00409 490 aaPredicted RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PAX7P23759 505 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 USP39Q53GS9 565 aaKnown RBP10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CCDC80Q76M96 950 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 DSG4Q86SJ6 1040 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 PRRG3Q9BZD7 231 aa10.17□□□□□ -0.78
TRERF1-204ENST00000372922 CCDC85CA6NKD9 419 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 EIF2S1P05198 315 aaKnown RBP10.16□□□□□ -0.78
TRERF1-204ENST00000372922 CCNG1P51959 295 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 RETSATQ6NUM9 610 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 ZCCHC8Q6NZY4 707 aaKnown RBP10.16□□□□□ -0.78
TRERF1-204ENST00000372922 SLC44A2Q8IWA5 706 aaPredicted RBP10.16□□□□□ -0.78
TRERF1-204ENST00000372922 TC2NQ8N9U0 490 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 VTA1Q9NP79 307 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 DLGAP2Q9P1A6 1054 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 RWDD3Q9Y3V2 267 aa10.16□□□□□ -0.78
TRERF1-204ENST00000372922 TECPR2O15040 1411 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms