RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 LINC01565O15544 149 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 MICAL2O94851 1124 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 GLP2RO95838 553 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 RALAP11233 206 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 VDRP11473 427 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 CCDC130P13994 396 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 GBP1P32455 592 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 ADAM15Q13444 863 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 MTMR3Q13615 1198 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 PIGHQ14442 188 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-201ENST00000372447 CCDC85BQ15834 202 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-201ENST00000372447 CNGA2Q16280 664 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 PAQR9Q6ZVX9 377 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 SPATA2LQ8IUW3 424 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-201ENST00000372447 FUKQ8N0W3 1084 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 C1orf54Q8WWF1 131 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 SLCO2A1Q92959 643 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 HERPUD2Q9BSE4 406 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 CYP4F11Q9HBI6 524 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 ZDHHC18Q9NUE0 388 aa16.76■□□□□ 0.27
C9orf78-201ENST00000372447 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-201ENST00000372447 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
C9orf78-201ENST00000372447 XIRP2A4UGR9 3374 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 ECEL1O95672 775 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 BDNFP23560 247 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 CYP2F1P24903 491 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 KCNJ1P48048 391 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 GSCP56915 257 aaPredicted RBP16.75■□□□□ 0.27
C9orf78-201ENST00000372447 OGDHQ02218 1023 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
C9orf78-201ENST00000372447 LRRC38Q5VT99 294 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 C4orf50Q6ZRC1 276 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 TMC3Q7Z5M5 1100 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 TCEAL8Q8IYN2 117 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 NIPA2Q8N8Q9 360 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 SPPL2BQ8TCT7 592 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 SLC2A14Q8TDB8 520 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 C2orf15Q8WU43 125 aaKnown RBP16.75■□□□□ 0.27
C9orf78-201ENST00000372447 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 MAN1C1Q9NR34 630 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 PLAAQ9Y263 795 aa16.75■□□□□ 0.27
C9orf78-201ENST00000372447 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 F8VP50 259 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 KRT14P02533 472 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 ELF1P32519 619 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 GJC1P36383 396 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 RPL21P46778 160 aaKnown RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 LRIG3Q6UXM1 1119 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 FUBP3Q96I24 572 aaKnown RBP eCLIP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 HNRNPABQ99729 332 aaKnown RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 OSBPL8Q9BZF1 889 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 HOMER3Q9NSC5 361 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 GRHL1Q9NZI5 618 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 WDR35Q9P2L0 1181 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 KIAA1257Q9ULG3 409 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 MAFFQ9ULX9 164 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 PLXNA3P51805 1871 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 GOLGA8SH3BPF8 625 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 M0QYV0 167 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 SOAT2O75908 522 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 KRT3P12035 628 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 ADORA2BP29275 332 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 CETN2P41208 172 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 CACNA2D1P54289 1103 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 PLTPP55058 493 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 DHX9Q08211 1270 aaKnown RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 CTC1Q2NKJ3 1217 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 TTMPQ5BVD1 217 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 ZDHHC24Q6UX98 284 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 RCOR2Q8IZ40 523 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 FAM76AQ8TAV0 307 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 SLC7A14Q8TBB6 771 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 ARL8AQ96BM9 186 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 RBM41Q96IZ5 413 aaKnown RBP16.74■□□□□ 0.27
C9orf78-201ENST00000372447 MED10Q9BTT4 135 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 HEMGNQ9BXL5 484 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 DCLK3Q9C098 648 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 TMEM30AQ9NV96 361 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 HSFX1Q9UBD0 423 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
C9orf78-201ENST00000372447 PRRG1O14668 218 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 PPFIA2O75334 1257 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 ERBB2P04626 1255 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 C8AP07357 584 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-201ENST00000372447 TCF4P15884 667 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 RFC1P35251 1148 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-201ENST00000372447 GPD2P43304 727 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 GABRB2P47870 512 aa16.73■□□□□ 0.27
C9orf78-201ENST00000372447 LMAN1P49257 510 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms