RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.46
PDE6C-201ENST00000371447 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 A8MUI8 341 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
PDE6C-201ENST00000371447 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
PDE6C-201ENST00000371447 KDELC2Q7Z4H8 507 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 PIGWQ7Z7B1 504 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 OSTM1Q86WC4 334 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 SIX6OS1Q8N1H7 587 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 KBTBD7Q8WVZ9 684 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 MECRQ9BV79 373 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 IQCGQ9H095 443 aaKnown RBP12.2□□□□□ -0.46
PDE6C-201ENST00000371447 UBP1Q9NZI7 540 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
PDE6C-201ENST00000371447 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 CPP00450 1065 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
PDE6C-201ENST00000371447 TAF6P49848 677 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 LILRA4P59901 499 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 INCA1Q0VD86 236 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 BOLA3Q53S33 107 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 ZNF410Q86VK4 478 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 RNF34Q969K3 372 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 KLHL29Q96CT2 875 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 NRDE2Q9H7Z3 1164 aa12.2□□□□□ -0.46
PDE6C-201ENST00000371447 RRN3P2A6NIE6 340 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TNFAIP8L3Q5GJ75 292 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 LRRC6Q86X45 466 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 ARHGAP39Q9C0H5 1083 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 SIK2Q9H0K1 926 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 ZNF395Q9H8N7 513 aaPredicted RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TRIM49D1C9J1S8 452 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 MGAMO43451 1857 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 LPXNO60711 386 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 USP17L7P0C7H9 530 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 MAP2K5Q13163 448 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 CGB2Q6NT52 195 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 DRICH1Q6PGQ1 229 aaPredicted RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 PCGF5Q86SE9 256 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 SERAC1Q96JX3 654 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 FSBPO95073 299 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 SAT1P21673 171 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 PCK1P35558 622 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 ARL4AP40617 200 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 SCNN1GP51170 649 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 CLCNKBP51801 687 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 SLC8A3P57103 927 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TRIM32Q13049 653 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 CST9Q5W186 159 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 USP6NLQ92738 828 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 USP29Q9HBJ7 922 aa12.19□□□□□ -0.46
PDE6C-201ENST00000371447 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
PDE6C-201ENST00000371447 TRIP12Q14669 1992 aaPredicted RBP12.18□□□□□ -0.46
PDE6C-201ENST00000371447 MYBPHLA2RUH7 354 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 F8W810 466 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 GHRP10912 638 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 GABRB2P47870 512 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 TKTL1P51854 596 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 MGAT5Q09328 741 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 EGFL6Q8IUX8 553 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 WNT8BQ93098 351 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 ZIC5Q96T25 663 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDE6C-201ENST00000371447 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDE6C-201ENST00000371447 CBX6O95503 412 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 F2P00734 622 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 NCAM1P13591 858 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 STIP1P31948 543 aaKnown RBP12.18□□□□□ -0.46
PDE6C-201ENST00000371447 BCAT1P54687 386 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 VPS52Q8N1B4 723 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 ANKRD52Q8NB46 1076 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 USP33Q8TEY7 942 aa12.18□□□□□ -0.46
PDE6C-201ENST00000371447 MAGEB18Q96M61 343 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms