RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 MTSS1LQ765P7 747 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 GATAD2AQ86YP4 633 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 IPCEF1Q8WWN9 437 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 PRPF18Q99633 342 aaKnown RBP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 CCT7Q99832 543 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 GPAMQ9HCL2 828 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 CLTCQ00610 1675 aaKnown RBP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 MRNIPQ6NTE8 343 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 IMPAD1Q9NX62 359 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 HEY2Q9UBP5 337 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 DNAJC16Q9Y2G8 782 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 VDRP11473 427 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 TUBP50607 506 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 PLK1P53350 603 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 MAPK10P53779 464 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 NFIL3Q16649 462 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 ZNF280DQ6N043 979 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 LINC00523Q86TU6 105 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 VPS37AQ8NEZ2 397 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 NECAB2Q7Z6G3 386 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 SYTL1Q8IYJ3 562 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 RBM22Q9NW64 420 aaKnown RBP eCLIP12.91□□□□□ -0.34
TMEM56-201ENST00000370203 PHTF1Q9UMS5 762 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 SNX13Q9Y5W8 968 aa12.91□□□□□ -0.34
TMEM56-201ENST00000370203 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TBC1D12O60347 775 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 GLP2RO95838 553 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 CCNG1P51959 295 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TRAF2Q12933 501 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 FAR2Q96K12 515 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 ZSWIM1Q9BR11 485 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 MYO3AQ8NEV4 1616 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 ENO2P09104 434 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 FMO4P31512 558 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 CCR4P51679 360 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TRPM8Q7Z2W7 1104 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 BBS7Q8IWZ6 715 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 RELTQ969Z4 430 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 SEPHS2Q99611 448 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 APOA1P02647 267 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 VCLP18206 1134 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TTLL9Q3SXZ7 439 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 GTF3C2Q8WUA4 911 aaPredicted RBP12.9□□□□□ -0.34
TMEM56-201ENST00000370203 FIG4Q92562 907 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 USP1O94782 785 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 EGFRP00533 1210 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 KRT8P05787 483 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 BCAT1P54687 386 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 ZNF438Q7Z4V0 828 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 MICU2Q8IYU8 434 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 GRAMD1AQ96CP6 724 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 SYT15Q9BQS2 421 aa12.9□□□□□ -0.34
TMEM56-201ENST00000370203 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.35
TMEM56-201ENST00000370203 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.35
TMEM56-201ENST00000370203 HEATR4Q86WZ0 1026 aa12.9□□□□□ -0.35
TMEM56-201ENST00000370203 TDRD5Q8NAT2 981 aaKnown RBP12.9□□□□□ -0.35
TMEM56-201ENST00000370203 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.35
TMEM56-201ENST00000370203 ATP13A1Q9HD20 1204 aa12.9□□□□□ -0.35
TMEM56-201ENST00000370203 PSMD12O00232 456 aaPredicted RBP12.89□□□□□ -0.35
TMEM56-201ENST00000370203 ATP6V1C1P21283 382 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 YWHAZP63104 245 aaKnown RBP12.89□□□□□ -0.35
TMEM56-201ENST00000370203 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 CSGALNACT1Q8TDX6 532 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
TMEM56-201ENST00000370203 CMTM5Q96DZ9 223 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 MARK4Q96L34 752 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 MIEF1Q9NQG6 463 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 INTS13Q9NVM9 706 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 IL1RAPL1Q9NZN1 696 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 TBX4P57082 545 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
TMEM56-201ENST00000370203 GFM2Q969S9 779 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms