RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 PPM1LQ5SGD2 360 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 DAB2IPQ5VWQ8 1189 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 DNAJB7Q7Z6W7 309 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 CPNE8Q86YQ8 564 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 ALG3Q92685 438 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 KRT35Q92764 455 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 PSMB7Q99436 277 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-202ENST00000368662 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 MYO16Q9Y6X6 1858 aa12.84□□□□□ -0.35
TUBE1-202ENST00000368662 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.35
TUBE1-202ENST00000368662 CXCR5P32302 372 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 SH3PXD2AQ5TCZ1 1133 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 SEL1L2Q5TEA6 688 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 CCDC181Q5TID7 509 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 SCYL2Q6P3W7 929 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 EXD1Q8NHP7 514 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 TEKT4Q8WW24 435 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 SERPINB11Q96P15 392 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.35
TUBE1-202ENST00000368662 SMOC2Q9H3U7 446 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 FAM204AQ9H8W3 233 aa12.83□□□□□ -0.35
TUBE1-202ENST00000368662 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.83□□□□□ -0.35
TUBE1-202ENST00000368662 GREB1Q4ZG55 1949 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 TRANK1O15050 2925 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 MDM4O15151 490 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 SRGAP2O75044 1071 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 ZMYND10O75800 440 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 ZRANB2O95218 330 aaKnown RBP eCLIP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 RARGP13631 454 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 PAFAH1B1P43034 410 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 MARCKSL1P49006 195 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 TUBP50607 506 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 CKAP4Q07065 602 aaKnown RBP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 LRIT3Q3SXY7 679 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 MSANTD2Q6P1R3 559 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 PSTKQ8IV42 348 aaKnown RBP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 RCOR2Q8IZ40 523 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 DQX1Q8TE96 717 aaKnown RBP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 MRPL38Q96DV4 380 aaKnown RBP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 MAN1C1Q9NR34 630 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 DDIT4Q9NX09 232 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 PCSK1NQ9UHG2 260 aa12.83□□□□□ -0.36
TUBE1-202ENST00000368662 TTC7AQ9ULT0 858 aaPredicted RBP12.83□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
TUBE1-202ENST00000368662 CDH23Q9H251 3354 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 IGLV3-25P01717 112 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 TCF4P15884 667 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
TUBE1-202ENST00000368662 IL1R2P27930 398 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 GJC1P36383 396 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 COPS2P61201 443 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 NME3Q13232 169 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 NNTQ13423 1086 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ARL13BQ3SXY8 428 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 OTUD1Q5VV17 481 aaPredicted RBP12.82□□□□□ -0.36
TUBE1-202ENST00000368662 CREG2Q8IUH2 290 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 MAP7D3Q8IWC1 876 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 CEP112Q8N8E3 955 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 SLC22A17Q8WUG5 538 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 TLE6Q9H808 572 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ZWILCHQ9H900 591 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.36
TUBE1-202ENST00000368662 MYO7AQ13402 2215 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF840PA6NDX5 716 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 IRAK2O43187 625 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 CEP104O60308 925 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 TLR5O60602 858 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 XYLBO75191 536 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 FGF19O95750 216 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 POU2F2P09086 479 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
TUBE1-202ENST00000368662 DUSP6Q16828 381 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 HECTD3Q5T447 861 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 KLHDC10Q6PID8 442 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 NTAN1Q96AB6 310 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
TUBE1-202ENST00000368662 MTCL1Q9Y4B5 1905 aaKnown RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 TMEM265A0A087WTH1 108 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 SYNJ2BP-COX16A0A087WUM0 186 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PGRMC1O00264 195 aaKnown RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF185O15231 689 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms