RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 FIGNQ5HY92 759 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 NAA35Q5VZE5 725 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 TADA2BQ86TJ2 420 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 FAM149B1Q96BN6 582 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 PPP1R9BQ96SB3 815 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 CDK5RAP1Q96SZ6 601 aaKnown RBP15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 FOXQ1Q9C009 403 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 MFSD1Q9H3U5 465 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 SH3BP1Q9Y3L3 701 aa15.78■□□□□ 0.12
SMPDL3A-201ENST00000368440 E2F8A0AVK6 867 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 MSI1O43347 362 aaKnown RBP15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 STC2O76061 302 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 FERP16591 822 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 STARD6P59095 220 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 PRKCQQ04759 706 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 PDGFRLQ15198 375 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 OR6B2Q6IFH4 312 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 FMNL3Q8IVF7 1028 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 BBS7Q8IWZ6 715 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 SPC24Q8NBT2 197 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 RNF139Q8WU17 664 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 DDX23Q9BUQ8 820 aaKnown RBP15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 NAALADL1Q9UQQ1 740 aa15.77■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC12A8A0AV02 714 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 LSM8O95777 96 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 GYPCP04921 128 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 KPNA1P52294 538 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ITPRIPL2Q3MIP1 535 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SYPL2Q5VXT5 272 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 MSANTD2Q6P1R3 559 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 TXNDC11Q6PKC3 985 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 OLFML1Q6UWY5 402 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 FBXL6Q8N531 539 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 PDLIM2Q96JY6 352 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 EDEM3Q9BZQ6 932 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SYNCQ9H7C4 482 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ECT2Q9H8V3 914 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 OLA1Q9NTK5 396 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 MTF2Q9Y483 593 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 MYOFQ9NZM1 2061 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SPECC1L-ADORA2AF8WAN1 911 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SART1O43290 800 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 PI15O43692 258 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 GRAP2O75791 330 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 KLKB1P03952 638 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 NCAM1P13591 858 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 CTHP32929 405 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 GABRB2P47870 512 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF75DP51815 510 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ASIC2Q16515 512 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 NAIF1Q69YI7 327 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 HTR3DQ70Z44 454 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ERICH1Q86X53 443 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC30A5Q8TAD4 765 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ATP2A3Q93084 1043 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 NUP58Q9BVL2 599 aa15.76■□□□□ 0.11
SMPDL3A-201ENST00000368440 ITIH6Q6UXX5 1313 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 A0A1W2PQJ5 194 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 KANSL1LA0AUZ9 987 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 STK25O00506 426 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 CBFA2T2O43439 604 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 CYP17A1P05093 508 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 UNGP13051 313 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 PITX1P78337 314 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 CLEC16AQ2KHT3 1053 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 SFMBT2Q5VUG0 894 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 Q6ZNB5 142 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 XYLT1Q86Y38 959 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 DRC7Q8IY82 874 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 DQX1Q8TE96 717 aaKnown RBP15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRIM44Q96DX7 344 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 STRIP2Q9ULQ0 834 aa15.75■□□□□ 0.11
SMPDL3A-201ENST00000368440 KIAA1549LQ6ZVL6 1849 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TPM3P06753 285 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SKILP12757 684 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TARSP26639 723 aaKnown RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 GJA4P35212 333 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 YWHAZP63104 245 aaKnown RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 COG7P83436 770 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC6A3Q01959 620 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 GOLGA8FQ08AF8 430 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 GOLGA8DPQ0D2H9 430 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 GAB4Q2WGN9 574 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 MMS22LQ6ZRQ5 1243 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ADGRG2Q8IZP9 1017 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 CPA6Q8N4T0 437 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 KIAA1958Q8N8K9 716 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TMEM105Q8N8V8 129 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ADAM32Q8TC27 787 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms