RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 TOGARAM1Q9Y4F4 1720 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 URADA6NGE7 173 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 KCNE1P15382 129 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 CSF2RAP15509 400 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 CDR2Q01850 454 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 FAM26DQ5JW98 314 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 LRRC69Q6ZNQ3 347 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 LGI2Q8N0V4 545 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 VN1R2Q8NFZ6 395 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 HASPINQ8TF76 798 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 CISHQ9NSE2 258 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 PTPRJQ12913 1337 aa8.58□□□□□ -1.04
SSR2-202ENST00000368311 DRD1P21728 446 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 HSDL1Q3SXM5 330 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ACAD10Q6JQN1 1059 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SLC2A11Q9BYW1 496 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 A0A1B0GUA9 196 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 MAGEB16A2A368 324 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 KRT37O76014 449 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 CTSAP10619 480 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 EPHB2P29323 1055 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 HADHAP40939 763 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SLC12A3P55017 1021 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 BASP1P80723 227 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 COBLL1Q53SF7 1204 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ARMC12Q5T9G4 340 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TTC19Q6DKK2 380 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 RUBCNQ92622 972 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 RIT1Q92963 219 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 REPS1Q96D71 796 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 CCDC3Q9BQI4 270 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 FAM167BQ9BTA0 163 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 NAT9Q9BTE0 207 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 OSBPL1AQ9BXW6 950 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 DUSP16Q9BY84 665 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 NXF3Q9H4D5 531 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 NHEJ1Q9H9Q4 299 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ZKSCAN5Q9Y2L8 839 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 PCDHA13Q9Y5I0 950 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 HEATR9A2RTY3 570 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ESRRBO95718 433 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 CDK4P11802 303 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ITGB5P18084 799 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ARF4P18085 180 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 DGKGP49619 791 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 NDST1P52848 882 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 PLCL1Q15111 1095 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 NTRK3Q16288 839 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 BMT2Q1RMZ1 405 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 AASDHQ4L235 1098 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 FAM173BQ6P4H8 233 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TEX12Q9BXU0 123 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TMEM60Q9H2L4 133 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 PDZD7Q9H5P4 517 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 CFAP97Q9P2B7 532 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 DNAI1Q9UI46 699 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 TBC1D30Q9Y2I9 924 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SLC27A6Q9Y2P4 619 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 RIPK3Q9Y572 518 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 H0YHG0 523 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ENC1O14682 589 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 AP5Z1O43299 807 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ATG7O95352 703 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 PIGRP01833 764 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 SLC4A1P02730 911 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 STIP1P31948 543 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 MAPKAPK2P49137 400 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 GLE1Q53GS7 698 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 VARS2Q5ST30 1063 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 MAP3K21Q5TCX8 1036 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 PID1Q7Z2X4 250 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 KBTBD6Q86V97 674 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ARHGAP24Q8N264 748 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 ATOH1Q92858 354 aaPredicted RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 MAGOHBQ96A72 148 aaKnown RBP8.57□□□□□ -1.04
SSR2-202ENST00000368311 BTN2A3PQ96KV6 586 aa8.57□□□□□ -1.04
SSR2-202ENST00000368311 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 FPGTO14772 594 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 GUCY1B2O75343 617 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 FTLP02792 175 aaPredicted RBP8.56□□□□□ -1.04
SSR2-202ENST00000368311 OR56A5P0C7T3 313 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 KRT15P19012 456 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 MSH2P43246 934 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 RGS7P49802 495 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 LPIN1Q14693 890 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 PTRHD1Q6GMV3 140 aaKnown RBP8.56□□□□□ -1.04
SSR2-202ENST00000368311 PSTKQ8IV42 348 aaKnown RBP8.56□□□□□ -1.04
SSR2-202ENST00000368311 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 TMEM161BQ8NDZ6 487 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 CEP76Q8TAP6 659 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 UBLCP1Q8WVY7 318 aaPredicted RBP8.56□□□□□ -1.04
SSR2-202ENST00000368311 CABS1Q96KC9 395 aa8.56□□□□□ -1.04
SSR2-202ENST00000368311 ZYG11BQ9C0D3 744 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms