RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 NIF3L1Q9GZT8 377 aa12.78□□□□□ -0.36
TPR-201ENST00000367478 RAVER2Q9HCJ3 691 aaKnown RBP12.78□□□□□ -0.36
TPR-201ENST00000367478 ALG6Q9Y672 507 aa12.78□□□□□ -0.36
TPR-201ENST00000367478 CACNB2Q08289 660 aaPredicted RBP12.78□□□□□ -0.36
TPR-201ENST00000367478 XRRA1Q6P2D8 792 aa12.78□□□□□ -0.36
TPR-201ENST00000367478 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
TPR-201ENST00000367478 ODC1P11926 461 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 TSC22D1Q15714 1073 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 FAM228AQ86W67 206 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 SLC44A2Q8IWA5 706 aaPredicted RBP12.77□□□□□ -0.36
TPR-201ENST00000367478 NOL6Q9H6R4 1146 aaKnown RBP12.77□□□□□ -0.36
TPR-201ENST00000367478 STOML2Q9UJZ1 356 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.36
TPR-201ENST00000367478 OR6J1Q8NGC5 347 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 A0A088AWK7 358 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.36
TPR-201ENST00000367478 MCAMP43121 646 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 CPA2P48052 419 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 PIK3CGP48736 1102 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 CACNA2D1P54289 1103 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 NAA20P61599 178 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 SPIRE1Q08AE8 756 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 PRKAA1Q13131 559 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 NRDE2Q9H7Z3 1164 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 POLR1BQ9H9Y6 1135 aa12.77□□□□□ -0.36
TPR-201ENST00000367478 A0A0X1KG70 313 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 OR6B1O95007 311 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 LBPP18428 481 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 MROH7Q68CQ1 1323 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 PROX1Q92786 737 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 ROGDIQ9GZN7 287 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
TPR-201ENST00000367478 ATP10AO60312 1499 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 H3BN98 237 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 UBDO15205 165 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 CCDC166P0CW27 439 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 XRCC4Q13426 336 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 MYLPFQ96A32 169 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 RECQL5O94762 991 aaPredicted RBP12.77□□□□□ -0.37
TPR-201ENST00000367478 PDPK2PQ6A1A2 396 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 C1orf131Q8NDD1 294 aaKnown RBP12.77□□□□□ -0.37
TPR-201ENST00000367478 CHP1Q99653 195 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
TPR-201ENST00000367478 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 WDR62O43379 1518 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 GTF2H1P32780 548 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 MYBPC2Q14324 1141 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 PHF11Q9UIL8 331 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 PLA2G6O60733 806 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 SLC34A1Q06495 639 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 DSN1Q9H410 356 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 TRPC4Q9UBN4 977 aa12.77□□□□□ -0.37
TPR-201ENST00000367478 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 SKAP2O75563 359 aaPredicted RBP12.76□□□□□ -0.37
TPR-201ENST00000367478 GHRP10912 638 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 HPDLQ96IR7 371 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 TMCO1Q9UM00 188 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 SSNA1O43805 119 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 LRRC74BQ6ZQY2 392 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 TPCN2Q8NHX9 752 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ZCCHC2Q9C0B9 1178 aaKnown RBP12.76□□□□□ -0.37
TPR-201ENST00000367478 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 EGFRP00533 1210 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ITGALP20701 1170 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 DSG3P32926 999 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
TPR-201ENST00000367478 CLOCKO15516 846 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 AHCYL1O43865 530 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ACAD10Q6JQN1 1059 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 F5H6K3 240 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 TNFRSF21O75509 655 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CRABP2P29373 138 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 AQP5P55064 265 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 KLRC3Q07444 240 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ITGADQ13349 1161 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 BICRALQ6AI39 1079 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CD302Q8IX05 232 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CBFA2T3O75081 653 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CYP2A7P20853 494 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 AMPD2Q01433 879 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
TPR-201ENST00000367478 NR6A1Q15406 480 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 SYTL1Q8IYJ3 562 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 CORO2BQ9UQ03 480 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ACOT9Q9Y305 439 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 H7C4K7 107 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 LDOC1O95751 146 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms