RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 COL4A3Q01955 1670 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 FRYLO94915 3013 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 GON4LQ3T8J9 2241 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 GOLGA6L22H0YM25 854 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CYB561D2O14569 222 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 PLD2O14939 933 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 NCK2O43639 380 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 AGR2O95994 175 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CST3P01034 146 aaPredicted RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 C8AP07357 584 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SRGAP2BP0DMP2 458 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ODC1P11926 461 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 EDN3P14138 238 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 RHOQP17081 205 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ACAT1P24752 427 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 PSMC2P35998 433 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 HALP42357 657 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 GCLMP48507 274 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 MYL6P60660 151 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SNRPFP62306 86 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 RPS26P62854 115 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 POU5F1Q01860 360 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 PPP3CAQ08209 521 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CYP4F3Q08477 520 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ADCY1Q08828 1119 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 BFSP1Q12934 665 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SMAD4Q13485 552 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 STIM1Q13586 685 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF267Q14586 743 aaPredicted RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SMAD2Q15796 467 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 DUOXA2Q1HG44 320 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 AAK1Q2M2I8 961 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 EDRF1Q3B7T1 1238 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SV2CQ496J9 727 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ARSJQ5FYB0 599 aaPredicted RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 DCAF17Q5H9S7 520 aaPredicted RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 C1orf220Q5T0J3 134 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TCERG1LQ5VWI1 586 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CENPPQ6IPU0 288 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SPOPLQ6IQ16 392 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TTI2Q6NXR4 508 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 IGF2-ASQ6U949 168 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TMEM184AQ6ZMB5 413 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SCARA5Q6ZMJ2 495 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TRAPPC11Q7Z392 1133 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 USP37Q86T82 979 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ZBTB46Q86UZ6 589 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SUGP1Q8IWZ8 645 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ELOA2Q8IYF1 753 aaPredicted RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 FAM186BQ8IYM0 893 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 VWA5B2Q8N398 1253 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SDR16C5Q8N3Y7 309 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 PDCL2Q8N4E4 241 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TTC9BQ8N6N2 239 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 KREMEN2Q8NCW0 462 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 APPL2Q8NEU8 664 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CACTINQ8WUQ7 758 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 NELFBQ8WX92 580 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 NANOS1Q8WY41 292 aaKnown RBP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 BORCS6Q96GS4 357 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 HPDLQ96IR7 371 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 ZNF560Q96MR9 790 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TSPAN18Q96SJ8 248 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 RTP3Q9BQQ7 232 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CRISPLD1Q9H336 500 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 POMKQ9H5K3 350 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SFXN1Q9H9B4 322 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 KIAA1586Q9HCI6 787 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CD320Q9NPF0 282 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.35□□□□□ -1.87
PTPRC-203ENST00000367367 L1RE1Q9UN81 338 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 SSX2IPQ9Y2D8 614 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 TRAF6Q9Y4K3 522 aa3.35□□□□□ -1.87
PTPRC-203ENST00000367367 CCDC195A0A1B0GUA6 201 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 A0A1W2PNR3 127 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 FSD2A1L4K1 749 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 SLC22A31A6NKX4 558 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 CETN3O15182 167 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 CCL16O15467 120 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 TBC1D4O60343 1298 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 RFPL1O75677 317 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 TCEA3O75764 348 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 SOAT2O75908 522 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 OAZ2O95190 189 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 ZRANB2O95218 330 aaKnown RBP eCLIP3.34□□□□□ -1.87
PTPRC-203ENST00000367367 MAP3K6O95382 1288 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 ZIC2O95409 532 aaPredicted RBP3.34□□□□□ -1.87
PTPRC-203ENST00000367367 SEC24AO95486 1093 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 VNN1O95497 513 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 VNN2O95498 520 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 C4BPAP04003 597 aaKnown RBP3.34□□□□□ -1.87
PTPRC-203ENST00000367367 PF4V1P10720 104 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 EPB41P11171 864 aaKnown RBP3.34□□□□□ -1.87
PTPRC-203ENST00000367367 TYMPP19971 482 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 CCNE1P24864 410 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 RPL13P26373 211 aaKnown RBP3.34□□□□□ -1.87
PTPRC-203ENST00000367367 PNPLA4P41247 253 aa3.34□□□□□ -1.87
PTPRC-203ENST00000367367 PIK3CAP42336 1068 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms