RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 EMC1Q8N766 993 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 SEPT1Q8WYJ6 367 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 EMID1Q96A84 441 aaPredicted RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 PAFAH2Q99487 392 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 POLIQ9UNA4 740 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 GOLGA8RI6L899 631 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 MED7O43513 233 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 SPAG6O75602 509 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 TGDSO95455 350 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 KRT3P12035 628 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 KDELR1P24390 212 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 SERPINB3P29508 390 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 RPL22P35268 128 aaKnown RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 ARFIP2P53365 341 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 TFAMQ00059 246 aaKnown RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 CDK16Q00536 496 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 TNFAIP2Q03169 654 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 DCAKDQ8WVC6 231 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 EZH1Q92800 747 aaPredicted RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 GBP5Q96PP8 586 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 LBHD1Q9BQE6 289 aaPredicted RBP15.28■□□□□ 0.04
PRKN-204ENST00000366896 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 MANSC1Q9H8J5 431 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 KCNK13Q9HB14 408 aa15.28■□□□□ 0.04
PRKN-204ENST00000366896 A0A1B0GVG6 124 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 APOC4-APOC2K7ER74 178 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 APOC2P02655 101 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 DHRS4L1P0CG22 281 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 CYBAP13498 195 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 ELNP15502 786 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 SERPINB4P48594 390 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 TRIM32Q13049 653 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 IER5Q5VY09 327 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 C3orf62Q6ZUJ4 267 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 ARHGAP22Q7Z5H3 698 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 UNC45BQ8IWX7 931 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 EXOC8Q8IYI6 725 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 PDIK1LQ8N165 341 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRKN-204ENST00000366896 FBXO36Q8NEA4 188 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 TCP10LQ8TDR4 215 aa15.27■□□□□ 0.04
PRKN-204ENST00000366896 PRR11Q96HE9 360 aaPredicted RBP15.27■□□□□ 0.04
PRKN-204ENST00000366896 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.04
PRKN-204ENST00000366896 DMAP1Q9NPF5 467 aaPredicted RBP15.27■□□□□ 0.04
PRKN-204ENST00000366896 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
PRKN-204ENST00000366896 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.04
PRKN-204ENST00000366896 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.03
PRKN-204ENST00000366896 B4GALT4O60513 344 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 RARBP10826 455 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 TCF7P36402 384 aaPredicted RBP15.27■□□□□ 0.03
PRKN-204ENST00000366896 TRPC3Q13507 836 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 TAF5Q15542 800 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 SEPT7Q16181 437 aaKnown RBP15.27■□□□□ 0.03
PRKN-204ENST00000366896 FAM160B1Q5W0V3 765 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 RSAD2Q8WXG1 361 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 CYTH2Q99418 400 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 FBXO6Q9NRD1 293 aaPredicted RBP15.27■□□□□ 0.03
PRKN-204ENST00000366896 SLC17A7Q9P2U7 560 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 WASF2Q9Y6W5 498 aa15.27■□□□□ 0.03
PRKN-204ENST00000366896 LYNP07948 512 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 ESRRAP11474 423 aaPredicted RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 CD19P15391 556 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 STIP1P31948 543 aaKnown RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 RAP1GDS1P52306 607 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 OSTNP61366 133 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 THOC5Q13769 683 aaKnown RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 BBS9Q3SYG4 887 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 ARHGAP18Q8N392 663 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 PDCD7Q8N8D1 485 aaKnown RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 B4GALNT2Q8NHY0 566 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 FAM167AQ96KS9 214 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 CCDC28BQ9BUN5 200 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 TSSK1BQ9BXA7 367 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 TMEM120AQ9BXJ8 343 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 NXF1Q9UBU9 619 aaKnown RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 PCSK1NQ9UHG2 260 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 LGR5O75473 907 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 PROZP22891 400 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 GSTT1P30711 240 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 PRMT2P55345 433 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 SLC18A2Q05940 514 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 FAM91A1Q658Y4 838 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 ARHGAP24Q8N264 748 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 PPTC7Q8NI37 304 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 NCSTNQ92542 709 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 CPXM1Q96SM3 734 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 FRMD8Q9BZ67 464 aaPredicted RBP15.26■□□□□ 0.03
PRKN-204ENST00000366896 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 C2orf40Q9H1Z8 148 aa15.26■□□□□ 0.03
PRKN-204ENST00000366896 ALG13Q9NP73 1137 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms