RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 C10orf76Q5T2E6 689 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 MIB1Q86YT6 1006 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 SLC41A1Q8IVJ1 513 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
MRPL55-213ENST00000366740 B3GALNT2Q8NCR0 500 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 PARD3BQ8TEW8 1205 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
MRPL55-213ENST00000366740 GTPBP2Q9BX10 602 aaKnown RBP12.35□□□□□ -0.43
MRPL55-213ENST00000366740 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 SPHK2Q9NRA0 654 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 DEC1Q9P2X7 70 aa12.35□□□□□ -0.43
MRPL55-213ENST00000366740 COL5A1P20908 1838 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-213ENST00000366740 CABIN1Q9Y6J0 2220 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 TBC1D3BA6NDS4 549 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 ZNF217O75362 1048 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
MRPL55-213ENST00000366740 ZDHHC11BP0C7U3 371 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 NTSR1P30989 418 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 PRCPP42785 496 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-213ENST00000366740 SLC14A1Q13336 389 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 NFIL3Q16649 462 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 BTBD8Q5XKL5 378 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 BBS7Q8IWZ6 715 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 CHCHD4Q8N4Q1 142 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 OR6B3Q8NGW1 331 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 FBXO32Q969P5 355 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 WBP2Q969T9 261 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 ELMO3Q96BJ8 720 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 GABRG3Q99928 467 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
MRPL55-213ENST00000366740 GOLGA4Q13439 2230 aaKnown RBP12.34□□□□□ -0.43
MRPL55-213ENST00000366740 CLDN5O00501 218 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 TRIM24O15164 1050 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 GREM1O60565 184 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 SYPP08247 313 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 NDUFV2P19404 249 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 MYL6P60660 151 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 TNNC1P63316 161 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ZNF658Q5TYW1 1059 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 CEP135Q66GS9 1140 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 PAQR9Q6ZVX9 377 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 OR2I1PQ8NGU4 316 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ADAMTS14Q8WXS8 1223 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ZNF419Q96HQ0 510 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 HSPA12BQ96MM6 686 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 COMMD8Q9NX08 183 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 GPSM3Q9Y4H4 160 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
MRPL55-213ENST00000366740 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
MRPL55-213ENST00000366740 APC2O95996 2303 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 A8MXQ7 604 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 CACNG3O60359 315 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 KIF20AO95235 890 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 VNN1O95497 513 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 BMP6P22004 513 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 NR2F2P24468 414 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 ATICP31939 592 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 ANP32AP39687 249 aaKnown RBP12.32□□□□□ -0.44
MRPL55-213ENST00000366740 WASP42768 502 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 SLC5A3P53794 718 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 MCCD1P59942 119 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-213ENST00000366740 TRIP6Q15654 476 aaKnown RBP12.32□□□□□ -0.44
MRPL55-213ENST00000366740 ANO4Q32M45 955 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 HTR3DQ70Z44 454 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 SCAMP5Q8TAC9 235 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 ACOX2Q99424 681 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 CD93Q9NPY3 652 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 MARK1Q9P0L2 795 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 SUSD2Q9UGT4 822 aa12.32□□□□□ -0.44
MRPL55-213ENST00000366740 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms