RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 DHX57Q6P158 1386 aaKnown RBP0.27□□□□□ -2.37
RNU6-478P-201ENST00000363904 TENM1Q9UKZ4 2725 aa0.27□□□□□ -2.37
RNU6-478P-201ENST00000363904 SLC22A23A1A5C7 686 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 LCHNA4D1U4 455 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 CLIC1O00299 241 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 PCDH17O14917 1159 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 FOXH1O75593 365 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 IFNA2P01563 188 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 AMY1AP04745 511 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 SBK3P0C264 359 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 EN2P19622 333 aaPredicted RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 DRD3P35462 400 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 ADPRHP54922 357 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 KRTAP12-4P60329 112 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 CTXN1P60606 82 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 CCT2P78371 535 aaKnown RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 KPNB1Q14974 876 aaKnown RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 DDR2Q16832 855 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 MUM1L1Q5H9M0 696 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 PIK3CD-AS1Q5SR53 167 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 ARHGAP40Q5TG30 622 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 FAAP20Q6NZ36 180 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 C8orf82Q6P1X6 216 aaPredicted RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 LAYNQ6UX15 382 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 FGD2Q7Z6J4 655 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 CADM3Q8N126 398 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZGPATQ8N5A5 531 aaKnown RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 ANKRD44Q8N8A2 993 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 IL17RDQ8NFM7 739 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 OR14A16Q8NHC5 309 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 PIGKQ92643 395 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 HOXB13Q92826 284 aaPredicted RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 SCAMP4Q969E2 229 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 HIC2Q96JB3 615 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 LINC00479Q96M42 142 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 PRR25Q96S07 402 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 RTBDNQ9BSG5 229 aaPredicted RBP0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 HTATIP2Q9BUP3 242 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 ADI1Q9BV57 179 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 TM2D2Q9BX73 214 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 GREM2Q9H772 168 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 SNX15Q9NRS6 342 aa0.26□□□□□ -2.37
RNU6-478P-201ENST00000363904 KIR2DS5A0A0G2JLQ3 304 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 TCP11X1B4DZS4 312 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 KIR2DS3K7RE56 304 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 PSMD9O00233 223 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ADCY3O60266 1144 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 KCNJ13O60928 360 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 KCNA5P22460 613 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ITGB8P26012 769 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 TIMP3P35625 211 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ETFBP38117 255 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 GYS2P54840 703 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 KCNA1Q09470 495 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 SREBF2Q12772 1141 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 SNTA1Q13424 505 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 MFSD13AQ14CX5 517 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZNF876PQ49A33 203 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 FLYWCH1Q4VC44 716 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZNF326Q5BKZ1 582 aaKnown RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 CREB3L3Q68CJ9 461 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 FRMD7Q6ZUT3 714 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 CAND1Q86VP6 1230 aaKnown RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 LMNTD2Q8IXW0 634 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 CELF2-AS1Q8N7Q2 184 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 EFHBQ8N7U6 833 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 DCBLD1Q8N8Z6 715 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 CNBD1Q8NA66 436 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZPLD1Q8TCW7 415 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 FAM216AQ8WUB2 273 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 FATE1Q969F0 183 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZNF669Q96BR6 464 aaPredicted RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 LGALS12Q96DT0 336 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 ZNF668Q96K58 619 aaPredicted RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 RBM4BQ9BQ04 359 aaKnown RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 SIK2Q9H0K1 926 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 AAMDCQ9H7C9 122 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 EVA1AQ9H8M9 152 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 CCM2LQ9NUG4 571 aaPredicted RBP0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 IFT57Q9NWB7 429 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 DPP7Q9UHL4 492 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 SSX2IPQ9Y2D8 614 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
RNU6-478P-201ENST00000363904 TULP2O00295 520 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 MDM4O15151 490 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 PRKNO60260 465 aaPredicted RBP0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 RAB11FIP3O75154 756 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 CHEK2O96017 543 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 TSHRP16473 764 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 TFEBP19484 476 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 NR1D1P20393 614 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 RPS6KB1P23443 525 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 LSP1P33241 339 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 SLC6A9P48067 706 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 PSMC1P62191 440 aaKnown RBP0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 RAE1P78406 368 aaKnown RBP0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 ATP8B2P98198 1209 aa0.24□□□□□ -2.37
RNU6-478P-201ENST00000363904 MTA1Q13330 715 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms