RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MED14O60244 1454 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SAC3D1A6NKF1 404 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 ERI2A8K979 691 aaKnown RBP18.9■□□□□ 0.62
SHANK1-202ENST00000359082 PDE5AO76074 875 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 CYP11B2P19099 503 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 PEX5P50542 639 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 RPL10AP62906 217 aaKnown RBP18.9■□□□□ 0.62
SHANK1-202ENST00000359082 LRRC6Q86X45 466 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 UCMAQ8WVF2 138 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 DUSP10Q9Y6W6 482 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 OGTO15294 1046 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 TRIM13O60858 407 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 IL5RAQ01344 420 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 BMPR2Q13873 1038 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 DGKKQ5KSL6 1271 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 DPP10Q8N608 796 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 UXS1Q8NBZ7 420 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 PIK3R5Q8WYR1 880 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SERAC1Q96JX3 654 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 SPON1Q9HCB6 807 aa18.9■□□□□ 0.62
SHANK1-202ENST00000359082 CKMP06732 381 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 MTSS1LQ765P7 747 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 TRPC4APQ8TEL6 797 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 CGRRF1Q99675 332 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 MIEF1Q9NQG6 463 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 LNPEPQ9UIQ6 1025 aa18.89■□□□□ 0.62
SHANK1-202ENST00000359082 MEI4A8MW99 385 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 CAPN1P07384 714 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 RASA2Q15283 850 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 COLGALT1Q8NBJ5 622 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ERLEC1Q96DZ1 483 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 UBXN6Q9BZV1 441 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 KLHL25Q9H0H3 589 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 CNTNAP2Q9UHC6 1331 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 CASTOR2A6NHX0 329 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 FGFR1P11362 822 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 CD44P16070 742 aaKnown RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 NAMPTP43490 491 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 KPNB1Q14974 876 aaKnown RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 C3orf20Q8ND61 904 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ZNF512BQ96KM6 892 aaPredicted RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 GLT1D1Q96MS3 346 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 DRG1Q9Y295 367 aaKnown RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 TRIM24O15164 1050 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 BCAT1P54687 386 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 FAM131BQ86XD5 332 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ADAM30Q9UKF2 790 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ZNF484Q5JVG2 852 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 NECAB2Q7Z6G3 386 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 ZSWIM2Q8NEG5 633 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 LPCAT1Q8NF37 534 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 FAM120BQ96EK7 910 aaKnown RBP18.89■□□□□ 0.61
SHANK1-202ENST00000359082 SH3GL1Q99961 368 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 CEP41Q9BYV8 373 aa18.89■□□□□ 0.61
SHANK1-202ENST00000359082 TNNI3P19429 210 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CYP4Z2PQ8N1L4 340 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 C19orf60Q96EN9 201 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 TPD52L3Q96J77 140 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 MT-CO1P00395 513 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 IFNA14P01570 189 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 PSMC6P62333 389 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 TMEM26Q6ZUK4 368 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 FAM228AQ86W67 206 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 NACC2Q96BF6 587 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 ADGRE3Q9BY15 652 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 IL1RAPL1Q9NZN1 696 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 TDRKHQ9Y2W6 561 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 PCDH8O95206 1070 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 KRT20P35900 424 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 SCTRP47872 440 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 NUP107P57740 925 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 GSTA3Q16772 222 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 PLEKHA7Q6IQ23 1121 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 RIPOR1Q6ZS17 1223 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 COMMD2Q86X83 199 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 EPHX4Q8IUS5 362 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CCNJLQ8IV13 435 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 RSPH1Q8WYR4 309 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CDC42EP4Q9H3Q1 356 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 ELOVL6Q9H5J4 265 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 A0A087X0T9 212 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 SYNCRIPO60506 623 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 FAM228BP0C875 321 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 ARP10275 920 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CYP2F1P24903 491 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 GTF2E2P29084 291 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CRYMQ14894 314 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 UTP15Q8TED0 518 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 SEMA4DQ92854 862 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 NMD3Q96D46 503 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CARD9Q9H257 536 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CNOT3O75175 753 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CALB2P22676 271 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SHANK1-202ENST00000359082 CBWD1Q9BRT8 395 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms