RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ALDH18A1P54886 795 aaKnown RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 CACNB2Q08289 660 aaPredicted RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 OASLQ15646 514 aaKnown RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 E2F7Q96AV8 911 aa11.59□□□□□ -0.55
SSU72-202ENST00000359060 GBA2Q9HCG7 927 aaPredicted RBP11.59□□□□□ -0.55
SSU72-202ENST00000359060 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
SSU72-202ENST00000359060 TLK1Q9UKI8 766 aa11.59□□□□□ -0.55
SSU72-202ENST00000359060 DNAJC8O75937 253 aaPredicted RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 SETSIPP0DME0 302 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PNPLA4P41247 253 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 GBE1Q04446 702 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 NOMO1Q15155 1222 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PIGWQ7Z7B1 504 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 HASPINQ8TF76 798 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 DPEP3Q9H4B8 488 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PLEKHA5Q9HAU0 1116 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 XAB2Q9HCS7 855 aaKnown RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 ETNK2Q9NVF9 386 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 NR2E3Q9Y5X4 410 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 CLDN5O00501 218 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 FAM155BO75949 473 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 TGM2P21980 687 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 GRM5P41594 1212 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 STX3Q13277 289 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PDK1Q15118 436 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 DRICH1Q6PGQ1 229 aaPredicted RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 FITM2Q8N6M3 262 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PLD5Q8N7P1 536 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 COLGALT1Q8NBJ5 622 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 ZNF669Q96BR6 464 aaPredicted RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 PIWIL1Q96J94 861 aaKnown RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 RPS6KL1Q9Y6S9 549 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 C2CD4BA6NLJ0 364 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 HCRTO43612 131 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 USP12O75317 370 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 IQCF3P0C7M6 154 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 SMIM10L2AP0DMW4 78 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 SMIM10L2BP0DMW5 78 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 MYL2P10916 166 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 EPHB2P29323 1055 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 TKTL1P51854 596 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 SLC20A2Q08357 652 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PDK4Q16654 411 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 GEN1Q17RS7 908 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 PIGZQ86VD9 579 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 NT5DC4Q86YG4 428 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 HIPK4Q8NE63 616 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 RNF139Q8WU17 664 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 EDEM1Q92611 657 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 FAM161BQ96MY7 647 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 SRPK1Q96SB4 655 aaKnown RBP11.58□□□□□ -0.56
SSU72-202ENST00000359060 FAM167BQ9BTA0 163 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 KRT82Q9NSB4 513 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 LGALS13Q9UHV8 139 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 EFR3BQ9Y2G0 817 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 FIS1Q9Y3D6 152 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 COMMD10Q9Y6G5 202 aa11.58□□□□□ -0.56
SSU72-202ENST00000359060 C17orf102A2RUQ5 167 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 DFFAO00273 331 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 B3GAT3O94766 335 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 GOT1P17174 413 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ARL1P40616 181 aaPredicted RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 SERPINB4P48594 390 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 YWHAZP63104 245 aaKnown RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 SLC25A11Q02978 314 aaKnown RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 MFSD10Q14728 455 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 CA9Q16790 459 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 SPRED3Q2MJR0 410 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 AGGF1Q8N302 714 aaeCLIP11.57□□□□□ -0.56
SSU72-202ENST00000359060 DTX3LQ8TDB6 740 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 CLEC4CQ8WTT0 213 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 LGMNQ99538 433 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 FRMD8Q9BZ67 464 aaPredicted RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 MAF1Q9H063 256 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 COL4A5P29400 1685 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 CASTOR2A6NHX0 329 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 SMPD1P17405 629 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ZNF157P51786 506 aaPredicted RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 NRXN2Q9P2S2 1712 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ATXN2Q99700 1313 aaKnown RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 WDR27A2RRH5 827 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 TM9SF1O15321 606 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 HSPA4LO95757 839 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 NCALDP61601 193 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 DUSP28Q4G0W2 176 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 WSCD1Q658N2 575 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 IQSEC1Q6DN90 963 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 NIPA2Q8N8Q9 360 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 HTR3CQ8WXA8 447 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 MCRS1Q96EZ8 462 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms