RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 XRCC4Q13426 336 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 TAF5Q15542 800 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 SMTNL2Q2TAL5 461 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 TXNRD3NBQ6F5E7 133 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 PDZD4Q76G19 769 aaPredicted RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 ALLCQ8N6M5 410 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 PIWIL1Q96J94 861 aaKnown RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 ZIM3Q96PE6 472 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 LPIN3Q9BQK8 851 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 ULBP1Q9BZM6 244 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 ABCC13Q9NSE7 274 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
NFIX-201ENST00000358552 PRG3Q9Y2Y8 225 aaPredicted RBP13.83□□□□□ -0.2
NFIX-201ENST00000358552 A0A087WUV0 522 aaPredicted RBP13.82□□□□□ -0.2
NFIX-201ENST00000358552 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 APOL1O14791 398 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 BAIAP3O94812 1187 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 TIMP1P01033 207 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 KRT10P13645 584 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 HTR7P34969 479 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 GRIK1P39086 918 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 PSEN1P49768 467 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 CCL23P55773 120 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 GNGT1P63211 74 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 MRPS25P82663 173 aaKnown RBP13.82□□□□□ -0.2
NFIX-201ENST00000358552 DEUP1Q05D60 604 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 SCAPQ12770 1279 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 OASLQ15646 514 aaKnown RBP13.82□□□□□ -0.2
NFIX-201ENST00000358552 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 SLC9A4Q6AI14 798 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 GPR65Q8IYL9 337 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 ATP6V1G3Q96LB4 118 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 GDAP1L1Q96MZ0 367 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 PCDH9Q9HC56 1237 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 HSFX1Q9UBD0 423 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 CACNG4Q9UBN1 327 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 SNX24Q9Y343 169 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 RAD54BQ9Y620 910 aa13.82□□□□□ -0.2
NFIX-201ENST00000358552 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 I3L4J1 428 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 KIAA0355O15063 1070 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 KRT14P02533 472 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 ITGB1P05556 798 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 MYZAPP0CAP1 466 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 ECHS1P30084 290 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 KCNJ1P48048 391 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 HCAR3P49019 387 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 PLTPP55058 493 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 BCAR1P56945 870 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 GPR17Q13304 367 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 SNX1Q13596 522 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 ACTL9Q8TC94 416 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 HASPINQ8TF76 798 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 RSAD2Q8WXG1 361 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 SCLYQ96I15 445 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 SNRNP25Q9BV90 132 aaKnown RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 PHACTR1Q9C0D0 580 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 DPH5Q9H2P9 285 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 PCDH18Q9HCL0 1135 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 ZDHHC18Q9NUE0 388 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 DNAJB4Q9UDY4 337 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 AP4E1Q9UPM8 1137 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 NEU2Q9Y3R4 380 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 H3BRJ5 948 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 M0QYT0 321 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 DGKIO75912 1065 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 NCAM1P13591 858 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 RARGP13631 454 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 L1CAMP32004 1257 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 SLC11A1P49279 550 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 RPL10AP62906 217 aaKnown RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 OTUD4Q01804 1114 aaKnown RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 USP41Q3LFD5 358 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 AGBL2Q5U5Z8 902 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 CYP4V2Q6ZWL3 525 aaPredicted RBP13.81□□□□□ -0.2
NFIX-201ENST00000358552 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 MON1AQ86VX9 555 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 BCAS4Q8TDM0 211 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
NFIX-201ENST00000358552 RIN2Q8WYP3 895 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms