RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 BEND5Q7L4P6 421 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ARCQ7LC44 396 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 RNF139Q8WU17 664 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ATRIPQ8WXE1 791 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 MYADMQ96S97 322 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 SFMBT1Q9UHJ3 866 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 INTUQ9ULD6 942 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ADGRG1Q9Y653 693 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 SCINQ9Y6U3 715 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 C2CD4BA6NLJ0 364 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 OLFM2O95897 454 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 CKMP06732 381 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 DDX6P26196 483 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 NOS2P35228 1153 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ATP5C1P36542 298 aaKnown RBP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 MATKP42679 507 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 KRT83P78385 493 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ZXDBP98169 803 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 EFEMP1Q12805 493 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 SMAD2Q15796 467 aaKnown RBP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 DCUN1D2Q6PH85 259 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 CMTM8Q8IZV2 173 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ZNF276Q8N554 614 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ADAM32Q8TC27 787 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 CFAP57Q96MR6 1250 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 NUP85Q9BW27 656 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 ADAM33Q9BZ11 813 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 LACRTQ9GZZ8 138 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 NACA2Q9H009 215 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 SMG9Q9H0W8 520 aaKnown RBP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 MRPL47Q9HD33 250 aaKnown RBP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 OSGEPQ9NPF4 335 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 LUC7LQ9NQ29 371 aaKnown RBP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCNE1-202ENST00000357943 CALCOCO1Q9P1Z2 691 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 CDH7Q9ULB5 785 aa15.54■□□□□ 0.08
CCNE1-202ENST00000357943 OBSL1O75147 1896 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 ANAPC1Q9H1A4 1944 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 TRAV19A0A0A6YYK7 116 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 IL9P15248 144 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 PDGFRAP16234 1089 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 TFE3P19532 575 aaPredicted RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 GBP2P32456 591 aaPredicted RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 VAV2P52735 878 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 OGDHQ02218 1023 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 KLHDC10Q6PID8 442 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 MIB1Q86YT6 1006 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 ST13P5Q8NFI4 369 aaPredicted RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 ZSCAN18Q8TBC5 510 aaPredicted RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 DQX1Q8TE96 717 aaKnown RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 RXFP2Q8WXD0 754 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 CDK5RAP1Q96SZ6 601 aaKnown RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
CCNE1-202ENST00000357943 TRIM62Q9BVG3 475 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 GDE1Q9NZC3 331 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 CTTNBP2NLQ9P2B4 639 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 RASAL2Q9UJF2 1139 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 DNMT3LQ9UJW3 386 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 DUSP10Q9Y6W6 482 aa15.53■□□□□ 0.08
CCNE1-202ENST00000357943 TMEM191CA6NGB0 347 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 MSI1O43347 362 aaKnown RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 PRAMEF12O95522 483 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 MBL2P11226 248 aaPredicted RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 AVPR1AP37288 418 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 C15orf59Q2T9L4 293 aaPredicted RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 CCDC14Q49A88 953 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 OTUD1Q5VV17 481 aaPredicted RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 MSANTD2Q6P1R3 559 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 KIAA1328Q86T90 577 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 TADA2BQ86TJ2 420 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 TAC4Q86UU9 113 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 ARID3BQ8IVW6 561 aaPredicted RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 SLC35G2Q8TBE7 412 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 ZNF564Q8TBZ8 553 aaPredicted RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 NT5C3BQ969T7 300 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 BTBD6Q96KE9 485 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 ZFRQ96KR1 1074 aaKnown RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 ASB16Q96NS5 453 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 OLA1Q9NTK5 396 aaKnown RBP15.52■□□□□ 0.08
CCNE1-202ENST00000357943 SMPD4Q9NXE4 827 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 MARCH2Q9P0N8 246 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 THEGQ9P2T0 379 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 SALL4Q9UJQ4 1053 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 CCL26Q9Y258 94 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 CPQQ9Y646 472 aa15.52■□□□□ 0.08
CCNE1-202ENST00000357943 A0A0C4DFX4 3053 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 SOBPA7XYQ1 873 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 TRUB2O95900 331 aaKnown RBP15.51■□□□□ 0.07
CCNE1-202ENST00000357943 IGLV3-25P01717 112 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 LAMP2P13473 410 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 PFKLP17858 780 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 GPD1P21695 349 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 KCNQ1P51787 676 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 ATP11AP98196 1134 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 ZNF252P-AS1Q0IIN9 211 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 SLC25A52Q3SY17 297 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 FAM78AQ5JUQ0 283 aa15.51■□□□□ 0.07
CCNE1-202ENST00000357943 SH3PXD2AQ5TCZ1 1133 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms