RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 SCTRP47872 440 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 CPA2P48052 419 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 PRAMEP78395 509 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 STX3Q13277 289 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 ZNF235Q14590 738 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 FASTKD3Q14CZ7 662 aaKnown RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 ACAP1Q15027 740 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 EFTUD2Q15029 972 aaKnown RBP eCLIP3.79□□□□□ -1.81e-7■■■■□ 19.4
USP33-201ENST00000357428 SNX17Q15036 470 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 ANKRD20A8PQ5CZ79 823 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 FAM182AQ5T1J6 154 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 TMEM63BQ5T3F8 832 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 C9orf57Q5W0N0 161 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 TXNRD3NBQ6F5E7 133 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 CES3Q6UWW8 571 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 ZDHHC24Q6UX98 284 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 ANKRD23Q86SG2 305 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 RNF180Q86T96 592 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 EXOC3L1Q86VI1 746 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 UNC93AQ86WB7 457 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 MIB1Q86YT6 1006 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 B3GALNT2Q8NCR0 500 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 NDRG1Q92597 394 aaKnown RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 VPS39Q96JC1 886 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 TWNKQ96RR1 684 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 FRMD8Q9BZ67 464 aaPredicted RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 WWP1Q9H0M0 922 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 LHX5Q9H2C1 402 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 TSPYL2Q9H2G4 693 aaPredicted RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 DPEP3Q9H4B8 488 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 CYP4F11Q9HBI6 524 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 TSR3Q9UJK0 312 aaKnown RBP3.79□□□□□ -1.8
USP33-201ENST00000357428 NUDT5Q9UKK9 219 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 PCDHGC3Q9UN70 934 aa3.79□□□□□ -1.8
USP33-201ENST00000357428 CFLARO15519 480 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 USP12O75317 370 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 LGR5O75473 907 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ATP5HO75947 161 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 FBXO21O94952 628 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 JCHAINP01591 159 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 BGNP21810 368 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 BDNFP23560 247 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ADRA1DP25100 572 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ETFBP38117 255 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 CDKN2BP42772 138 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 CRADDP78560 199 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 MRPS6P82932 125 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 KDSRQ06136 332 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ITIH4Q14624 930 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 USP10Q14694 798 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 KBTBD12Q3ZCT8 623 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 SPRYD7Q5W111 196 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 OVOS1Q6IE37 1185 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 C4orf22Q6V702 233 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 SLC26A11Q86WA9 606 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ZDHHC17Q8IUH5 632 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ARID3BQ8IVW6 561 aaPredicted RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 DCP1BQ8IZD4 617 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 C12orf50Q8NA57 414 aaPredicted RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 PPHLN1Q8NEY8 458 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 RAB3IL1Q8TBN0 382 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 TCP10LQ8TDR4 215 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 HTR3CQ8WXA8 447 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 DDX1Q92499 740 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 E2F7Q96AV8 911 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ZFP42Q96MM3 310 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 FAM161BQ96MY7 647 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 RNF157Q96PX1 679 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 APBA2Q99767 749 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 LPIN3Q9BQK8 851 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 TUBB6Q9BUF5 446 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 MAF1Q9H063 256 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 RGS17Q9UGC6 210 aaPredicted RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 KCNH4Q9UQ05 1017 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 DRG1Q9Y295 367 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 IPPQ9Y573 584 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 MYH9P35579 1960 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 BRWD3Q6RI45 1802 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 SMIM28A0A1B0GU29 152 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 WDR27A2RRH5 827 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 SDR42E2A6NKP2 422 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 C2CD2LO14523 706 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 NEMP1O14524 444 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 PPEF2O14830 753 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ATG7O95352 703 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 GOT1P17174 413 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 NPR3P17342 541 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 MGAT1P26572 445 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 ENPEPQ07075 957 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 FAAP100Q0VG06 881 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 TAF11Q15544 211 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 TARBP2Q15633 366 aaKnown RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 QPCTQ16769 361 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 C10orf120Q5SQS8 335 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 CDCA2Q69YH5 1023 aaPredicted RBP3.78□□□□□ -1.8
USP33-201ENST00000357428 PMF1Q6P1K2 205 aa3.78□□□□□ -1.8
USP33-201ENST00000357428 KLC3Q6P597 504 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms