RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TEX13BQ9BXU2 312 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 ABCB10Q9NRK6 738 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 TOR4AQ9NXH8 423 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 PNPLA6Q8IY17 1366 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 HLA-DRAP01903 254 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 LTFP02788 710 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 DGCR6Q14129 220 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 DHFR2Q86XF0 187 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 TRIM48Q8IWZ4 208 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 RNF148Q8N7C7 305 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 CAMKK2Q96RR4 588 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 ACOX2Q99424 681 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 EPB41L1Q9H4G0 881 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 WHRNQ9P202 907 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 PRR23AA6NEV1 266 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 P4HA2O15460 535 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 PRDX5P30044 214 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 MAPK7Q13164 816 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 CSHL1Q14406 222 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 NT5DC3Q86UY8 548 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 ZSWIM2Q8NEG5 633 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 CDC42EP4Q9H3Q1 356 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 SH3BP1Q9Y3L3 701 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 RWDD3Q9Y3V2 267 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 ADCY6O43306 1168 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 CLTBP09497 229 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 MGAT5BQ3V5L5 792 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 SLC13A5Q86YT5 568 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 MTFMTQ96DP5 389 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 ERGIC2Q96RQ1 377 aa11.34□□□□□ -0.59
GTF3C1-201ENST00000356183 VPS26AO75436 327 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 BBOX1O75936 387 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 CASP4P49662 377 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 EZH2Q15910 746 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 TRMT5Q32P41 509 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PLA2G4FQ68DD2 849 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 KYQ8NBH2 561 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF671Q8TAW3 534 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PYDC1Q8WXC3 89 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 MED8Q96G25 268 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 RNF145Q96MT1 663 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 FRMD6Q96NE9 622 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 UBE2OQ9C0C9 1292 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 EURLQ9NYK6 297 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PNMA8CA0A1B0GUJ8 204 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 H3BN98 237 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 RGS20O76081 388 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 C4orf22Q6V702 233 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 CCDC126Q96EE4 140 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PRRG3Q9BZD7 231 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 LRCH1Q9Y2L9 728 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 AK9Q5TCS8 1911 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 C2orf81A6NN90 581 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 SPTLC1O15269 473 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PURAQ00577 322 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 GRAPQ13588 217 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF605Q86T29 641 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 BHLHE22Q8NFJ8 381 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 AENQ8WTP8 325 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 WRNIP1Q96S55 665 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 NMRK1Q9NWW6 199 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 HPGDP15428 266 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 LSM3P62310 102 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 ELF3P78545 371 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 EPHA7Q15375 998 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PHKG1Q16816 387 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 C2CD6Q53TS8 623 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 BDH2Q9BUT1 245 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 SLITRK2Q9H156 845 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 R3HDM2Q9Y2K5 976 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 AREL1O15033 823 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 GSTM5P46439 218 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 CAMK2GQ13555 558 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 ZNF483Q8TF39 744 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 PHF21BQ96EK2 531 aa11.33□□□□□ -0.6
GTF3C1-201ENST00000356183 RBMX2Q9Y388 322 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms