RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 FBXO27Q8NI29 283 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 KHSRPQ92945 711 aaKnown RBP eCLIP14.32□□□□□ -0.12
EBF3-201ENST00000355311 APOL2Q9BQE5 337 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 NXF3Q9H4D5 531 aaKnown RBP14.32□□□□□ -0.12
EBF3-201ENST00000355311 CCDC134Q9H6E4 229 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 LRRC42Q9Y546 428 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 TYROBPO43914 113 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 ZBED1O96006 694 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 SAT1P21673 171 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
EBF3-201ENST00000355311 NME3Q13232 169 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 CROCCP2Q86T23 111 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 ATP11CQ8NB49 1132 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 CCNYQ8ND76 341 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 PCDH19Q8TAB3 1148 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 NMRK1Q9NWW6 199 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 LGALS13Q9UHV8 139 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 FARP1Q9Y4F1 1045 aaPredicted RBP14.32□□□□□ -0.12
EBF3-201ENST00000355311 RLFQ13129 1914 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 UNC80Q8N2C7 3258 aa14.32□□□□□ -0.12
EBF3-201ENST00000355311 PSME4Q14997 1843 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 hCG_2014768A0A024R1R8 64 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 A8MXQ7 604 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 EDF1O60869 148 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 ATP6V1C1P21283 382 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 GPD1P21695 349 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 NDUFV1P49821 464 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 PAN2Q504Q3 1202 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 ISLR2Q6UXK2 745 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 CLPTM1LQ96KA5 538 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 MANSC1Q9H8J5 431 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 ARL8BQ9NVJ2 186 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 WDR35Q9P2L0 1181 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 C22orf31O95567 290 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 KDSRQ06136 332 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 KDELC2Q7Z4H8 507 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 POLNQ7Z5Q5 900 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 SLC25A41Q8N5S1 370 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 DCAKDQ8WVC6 231 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 SMARCAD1Q9H4L7 1026 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 DDX56Q9NY93 547 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 UBP1Q9NZI7 540 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 ZC3H7BQ9UGR2 993 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 PACSIN3Q9UKS6 424 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 PFKMP08237 780 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 IL4RP24394 825 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 PEX6Q13608 980 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 MFN1Q8IWA4 741 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 CCDC185Q8N715 623 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
EBF3-201ENST00000355311 KANSL3Q9P2N6 904 aa14.31□□□□□ -0.12
EBF3-201ENST00000355311 H3BRB1 525 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 KCNK1O00180 336 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 MED7O43513 233 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 LYPLA1O75608 230 aaPredicted RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 SERPINB4P48594 390 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 CES4AQ5XG92 561 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 FAM219BQ5XKK7 198 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 NME8Q8N427 588 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 NRG4Q8WWG1 115 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 GORASP1Q9BQQ3 440 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 TUT1Q9H6E5 874 aaKnown RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 ZNF358Q9NW07 568 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 ASNSD1Q9NWL6 643 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 ERAP1Q9NZ08 941 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 SNX10Q9Y5X0 201 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 MEIS3P2A8K0S8 358 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 DYNC1LI2O43237 492 aaPredicted RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 B4GALT4O60513 344 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 LSM8O95777 96 aaKnown RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 GOT1P17174 413 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 EDNRBP24530 442 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 AFF1P51825 1210 aaKnown RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 TTLL4Q14679 1199 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 CCDC6Q16204 474 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 PDK4Q16654 411 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 SOWAHAQ2M3V2 549 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 IL31Q6EBC2 164 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 CYP4V2Q6ZWL3 525 aaPredicted RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 DRAXINQ8NBI3 349 aaPredicted RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 AZIN2Q96A70 460 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 C20orf27Q9GZN8 174 aa14.3□□□□□ -0.12
EBF3-201ENST00000355311 DRG1Q9Y295 367 aaKnown RBP14.3□□□□□ -0.12
EBF3-201ENST00000355311 APOC4-APOC2K7ER74 178 aa14.29□□□□□ -0.12
EBF3-201ENST00000355311 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
EBF3-201ENST00000355311 ADCY6O43306 1168 aa14.29□□□□□ -0.12
EBF3-201ENST00000355311 KRT36O76013 467 aa14.29□□□□□ -0.12
EBF3-201ENST00000355311 APOC2P02655 101 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms