RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RNASEH2BQ5TBB1 312 aaKnown RBP17.92■□□□□ 0.46
VPS13B-201ENST00000355155 RNF168Q8IYW5 571 aaPredicted RBP17.92■□□□□ 0.46
VPS13B-201ENST00000355155 KCTD15Q96SI1 283 aaPredicted RBP17.92■□□□□ 0.46
VPS13B-201ENST00000355155 COLEC11Q9BWP8 271 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 RNF208Q9H0X6 261 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 TCEA3O75764 348 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 PECAM1P16284 738 aaPredicted RBP17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ZNF844Q08AG5 666 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 KRT81Q14533 505 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ZC3H12AQ5D1E8 599 aaKnown RBP17.91■□□□□ 0.46
VPS13B-201ENST00000355155 EXOC4Q96A65 974 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 VWCEQ96DN2 955 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 BEGAINQ9BUH8 593 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 MAK16Q9BXY0 300 aaKnown RBP17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 TPX2Q9ULW0 747 aaKnown RBP17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ZNF148Q9UQR1 794 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 FAM92AA1XBS5 289 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 I3L4J1 428 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 MMRN1Q13201 1228 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
VPS13B-201ENST00000355155 CDO1Q16878 200 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ZFYVE27Q5T4F4 411 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 KCNK16Q96T55 309 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 ANAPC5Q9UJX4 755 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 HTTP42858 3142 aa17.91■□□□□ 0.46
VPS13B-201ENST00000355155 YJEFN3A6XGL0 299 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 E7ENQ6 273 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 MCF2LO15068 1137 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 TTMPQ5BVD1 217 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 IZUMO3Q5VZ72 239 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 CCDC185Q8N715 623 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 C2orf15Q8WU43 125 aaKnown RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 TMEM209Q96SK2 561 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 HIPK3Q9H422 1215 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 USP29Q9HBJ7 922 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 FAN1Q9Y2M0 1017 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 GREB1Q4ZG55 1949 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 MYO16Q9Y6X6 1858 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 HMGB1P1B2RPK0 211 aaPredicted RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 EIF3HO15372 352 aaKnown RBP eCLIP17.9■□□□□ 0.461e-6■■■■□ 25.4
VPS13B-201ENST00000355155 ABHD2P08910 425 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 ADCY8P40145 1251 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 CXCR3P49682 368 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 EIF3EP60228 445 aaKnown RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 LLGL1Q15334 1064 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 TNFAIP8L3Q5GJ75 292 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 CNKSR3Q6P9H4 555 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 HFE2Q6ZVN8 426 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 OLFM3Q96PB7 478 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 FAM193BQ96PV7 902 aaPredicted RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 CSPG4P5Q96PW8 444 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 RUFY1Q96T51 708 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 FBXW11Q9UKB1 542 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 HACD1B0YJ81 288 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 RIPK2O43353 540 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 TERF2Q15554 542 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 GLIS1Q8NBF1 620 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 CALN1Q9BXU9 219 aa17.9■□□□□ 0.46
VPS13B-201ENST00000355155 ROPN1BQ9BZX4 212 aaPredicted RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 ROPN1Q9HAT0 212 aaPredicted RBP17.9■□□□□ 0.46
VPS13B-201ENST00000355155 F8W810 466 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 BDNFP23560 247 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 CYP2F1P24903 491 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 CYP2C18P33260 490 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 HTR7P34969 479 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 SKOR1P84550 965 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 PAFAH1B3Q15102 231 aaKnown RBP17.89■□□□□ 0.45
VPS13B-201ENST00000355155 SYPL2Q5VXT5 272 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 P3H4Q92791 437 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 CARNS1A5YM72 827 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 TRIM66O15016 1216 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 DGKIO75912 1065 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 DPYSQ14117 519 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 P3H1Q32P28 736 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 DCAF6Q58WW2 860 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 SPATA2LQ8IUW3 424 aaPredicted RBP17.89■□□□□ 0.45
VPS13B-201ENST00000355155 NAT8LQ8N9F0 302 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.45
VPS13B-201ENST00000355155 E7ESA3 106 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 TSHRP16473 764 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 OR1G1P47890 313 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 SLC11A1P49279 550 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ROR1Q01973 937 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 VARS2Q5ST30 1063 aaKnown RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 SCYL2Q6P3W7 929 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ATP6V1G3Q96LB4 118 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 TMEM121Q9BTD3 319 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 CWC15Q9P013 229 aaKnown RBP17.88■□□□□ 0.45
VPS13B-201ENST00000355155 NAALADL1Q9UQQ1 740 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 SCML2Q9UQR0 700 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ALDH2P05091 517 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 GALTP07902 379 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 RBP3P10745 1247 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ADRA1BP35368 520 aa17.88■□□□□ 0.45
VPS13B-201ENST00000355155 ATXN1P54253 815 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms