RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 BCCIPQ9P287 314 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDGFA-201ENST00000354513 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 SPEGQ15772 3267 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 NEDD8-MDP1E9PL57 170 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 CALUO43852 315 aaPredicted RBP16.72■□□□□ 0.27
PDGFA-201ENST00000354513 CISD3P0C7P0 127 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 RARGP13631 454 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 TYRP14679 529 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 ACO1P21399 889 aaKnown RBP16.72■□□□□ 0.27
PDGFA-201ENST00000354513 ITPKAP23677 461 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 KIF11P52732 1056 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 ZNF252P-AS1Q0IIN9 211 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 TRIM61Q5EBN2 209 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 PPP1R26Q5T8A7 1209 aaPredicted RBP16.72■□□□□ 0.27
PDGFA-201ENST00000354513 SH3PXD2AQ5TCZ1 1133 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 BTBD8Q5XKL5 378 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 ERLEC1Q96DZ1 483 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 TMEM121BQ9BXQ6 578 aaPredicted RBP16.72■□□□□ 0.27
PDGFA-201ENST00000354513 CYP3A43Q9HB55 503 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 PNPLA8Q9NP80 782 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 PILRBQ9UKJ0 227 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 PCDHA5Q9Y5H7 936 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 USP3Q9Y6I4 520 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 ZZEF1O43149 2961 aa16.72■□□□□ 0.27
PDGFA-201ENST00000354513 IGHV1OR15-9A0A0B4J2B8 117 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 STC2O76061 302 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 KLKB1P03952 638 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 CD58P19256 250 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 NDUFV2P19404 249 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 NTSR1P30989 418 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 ATP5C1P36542 298 aaKnown RBP16.71■□□□□ 0.27
PDGFA-201ENST00000354513 SYKP43405 635 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 KLHDC10Q6PID8 442 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 TPGS1Q6ZTW0 290 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 SYT12Q8IV01 421 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 FAM186BQ8IYM0 893 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 SPATA32Q96LK8 384 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 GABRG3Q99928 467 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 BBS2Q9BXC9 721 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 NT5C1AQ9BXI3 368 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 NACA2Q9H009 215 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 SLC6A17Q9H1V8 727 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
PDGFA-201ENST00000354513 TMEM131Q92545 1883 aa16.71■□□□□ 0.27
PDGFA-201ENST00000354513 ENGP17813 658 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 SPINK2P20155 84 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 CSRP1P21291 193 aaKnown RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 ENPEPQ07075 957 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 SPDYCQ5MJ68 293 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 DAB2IPQ5VWQ8 1189 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 LYSMD4Q5XG99 296 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 KRBA2Q6ZNG9 492 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 INTS8Q75QN2 995 aaKnown RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 TRMT11Q7Z4G4 463 aaKnown RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 SLC41A1Q8IVJ1 513 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 PGBD3Q8N328 593 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 DEFB119Q8N690 84 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 DEFB124Q8NES8 71 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 IPO4Q8TEX9 1081 aaKnown RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 ARID3AQ99856 593 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 TMEM8AQ9HCN3 771 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 FBXO10Q9UK96 956 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 RAD54BQ9Y620 910 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 GON4LQ3T8J9 2241 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 BHLHA9Q7RTU4 235 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 SMYD4Q8IYR2 804 aaPredicted RBP16.7■□□□□ 0.26
PDGFA-201ENST00000354513 DUSP16Q9BY84 665 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 CACNA2D2Q9NY47 1150 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 PLK2Q9NYY3 685 aa16.7■□□□□ 0.26
PDGFA-201ENST00000354513 CHD6Q8TD26 2715 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 PCNX2A6NKB5 2137 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 C1QTNF9BB2RNN3 333 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 WASH3PC4AMC7 463 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 MAP3K13O43283 966 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 PENKP01210 267 aaPredicted RBP16.69■□□□□ 0.26
PDGFA-201ENST00000354513 C1QTNF9P0C862 333 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 CEACAM1P13688 526 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 MAPK8P45983 427 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 DGKGP49619 791 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 KRT85P78386 507 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 RPL6Q02878 288 aaKnown RBP16.69■□□□□ 0.26
PDGFA-201ENST00000354513 FOXC1Q12948 553 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 UAP1L1Q3KQV9 507 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 ZNF394Q53GI3 561 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 C10orf120Q5SQS8 335 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 FYB2Q5VWT5 728 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 PIP4P1Q86T03 277 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 SLC4A11Q8NBS3 891 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 BHMTQ93088 406 aa16.69■□□□□ 0.26
PDGFA-201ENST00000354513 EEF2KMTQ96G04 330 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms