RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 THOC5Q13769 683 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 CCDC14Q49A88 953 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 SH3D19Q5HYK7 790 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 RIOX2Q8IUF8 465 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 SMC1BQ8NDV3 1235 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 FBXO27Q8NI29 283 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 TRAPPC12Q8WVT3 735 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 GBA2Q9HCG7 927 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 BTBD7Q9P203 1132 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 PPARGC1AQ9UBK2 798 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 HEY1Q9Y5J3 304 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 FAM159BA6NKW6 160 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 F8W8V4 182 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 ENO1P06733 434 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 SKIP12755 728 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 AMPD1P23109 780 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 HSDL1Q3SXM5 330 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 BOLA3Q53S33 107 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 NOL9Q5SY16 702 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 TMEM154Q6P9G4 183 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 LCLAT1Q6UWP7 414 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 EEPD1Q7L9B9 569 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 PLPPR4Q7Z2D5 763 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 RBM15BQ8NDT2 890 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 DTX3LQ8TDB6 740 aa25.43■■□□□ 1.66
CPNE1-202ENST00000352393 HBS1LQ9Y450 684 aaKnown RBP25.43■■□□□ 1.66
CPNE1-202ENST00000352393 HMX2A2RU54 273 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 SPDYE5A6NIY4 337 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 CYB561D2O14569 222 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 GRAP2O75791 330 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 PFKMP08237 780 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 IQCF3P0C7M6 154 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 STAG3L1P0CL83 205 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 NUDCD3Q8IVD9 361 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 UCMAQ8WVF2 138 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 FAM161BQ96MY7 647 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 SLC13A1Q9BZW2 595 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 MIS12Q9H081 205 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF395Q9H8N7 513 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 PCMTD2Q9NV79 361 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 BARX2Q9UMQ3 279 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 PPP1R12AO14974 1030 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 ATP5BP06576 529 aaKnown RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 P4HA1P13674 534 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 SP100P23497 879 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 PEX19P40855 299 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 DPH6Q7L8W6 267 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 GSDMBQ8TAX9 411 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 SIGLEC10Q96LC7 697 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 LBHD1Q9BQE6 289 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-202ENST00000352393 TAGLN3Q9UI15 199 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 TSPAN16Q9UKR8 245 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 WASF2Q9Y6W5 498 aa25.42■■□□□ 1.66
CPNE1-202ENST00000352393 NFKBIEO00221 500 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 BIRC5O15392 142 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 BPGMP07738 259 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 CRHR1P34998 444 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 NDST1P52848 882 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 RCN2Q14257 317 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 ZRSR2Q15696 482 aaKnown RBP25.41■■□□□ 1.66
CPNE1-202ENST00000352393 CA9Q16790 459 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 TRMT10BQ6PF06 316 aaKnown RBP25.41■■□□□ 1.66
CPNE1-202ENST00000352393 NET1Q7Z628 596 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-202ENST00000352393 TBCBQ99426 244 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 SNRNP25Q9BV90 132 aaKnown RBP25.41■■□□□ 1.66
CPNE1-202ENST00000352393 CCDC106Q9BWC9 280 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.41■■□□□ 1.66
CPNE1-202ENST00000352393 EVPLQ92817 2033 aa25.41■■□□□ 1.66
CPNE1-202ENST00000352393 MAP3K6O95382 1288 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 CLCN3P51790 818 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 AQP5P55064 265 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TBCCQ15814 346 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 C4orf22Q6V702 233 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 CRLF3Q8IUI8 442 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF483Q8TF39 744 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 HPDLQ96IR7 371 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 EBNA1BP2Q99848 306 aaKnown RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TRIM56Q9BRZ2 755 aaKnown RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF670Q9BS34 389 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 KRT82Q9NSB4 513 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 PIM2Q9P1W9 311 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 RGS17Q9UGC6 210 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TPSB2P20231 275 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 MXRA7P84157 204 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TPSAB1Q15661 275 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TREML2Q5T2D2 321 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 SCYL2Q6P3W7 929 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 OLFML1Q6UWY5 402 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 APOBEC3FQ8IUX4 373 aaKnown RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 CDKL3Q8IVW4 592 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 NDUFAF2Q8N183 169 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 PPFIBP2Q8ND30 876 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 FAM172AQ8WUF8 416 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 ZBTB10Q96DT7 871 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 C20orf27Q9GZN8 174 aa25.4■■□□□ 1.66
CPNE1-202ENST00000352393 NGRNQ9NPE2 291 aaKnown RBP25.4■■□□□ 1.66
CPNE1-202ENST00000352393 TM7SF2O76062 418 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 MCF2P10911 925 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 SERPINB9P50453 376 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 TRMT5Q32P41 509 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms